Gene
| Gene Model ID | pfu_aug2.0_7114.1_16242 |
|---|---|
| Locus | scaffold7114.1 : 2876 ... 6576 : + |
| To GenomeBrowser | scaffold7114.1:2876..6576 |
| Genes list of scaffold | scaffold7114.1 |
| Synonym | pfu_aug1.0_17573.1_47110 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cre-cmd-1 protein | GO:0000922 GO:0002027 GO:0005509 GO:0005513 GO:0005813 GO:0005876 GO:0006898 GO:0007052 GO:0009792 GO:0010880 GO:0016301 GO:0016310 GO:0016477 GO:0019901 GO:0019904 GO:0021762 GO:0030017 GO:0030801 GO:0031432 GO:0031965 GO:0031996 GO:0031997 GO:0032465 GO:0032516 GO:0032880 GO:0034704 GO:0035307 GO:0042981 GO:0043274 GO:0043277 GO:0044325 GO:0051296 GO:0051343 GO:0055117 GO:0060316 GO:0070062 GO:0071944 GO:0072542 GO:0072686 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7114.1_16242.t1 | 2 | 1 | EF-hand_4 | 5 | 73 | 6.5e-09 | 35.4 | 9.7e-06 | 0.0072 | 16.0 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 1 | EF-hand_1 | 12 | 40 | 2.5e-35 | 117.0 | 1.2e-11 | 9.1e-09 | 33.9 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 1 | EF-hand_8 | 12 | 38 | 4.0e-31 | 106.4 | 4.7e-05 | 0.035 | 13.7 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 1 | EF-hand_6 | 12 | 41 | 3.0e-30 | 101.3 | 1.2e-12 | 8.7e-10 | 37.6 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 1 | EF-hand_7 | 14 | 73 | 6.9e-33 | 112.5 | 4.0e-18 | 3.0e-15 | 56.1 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 1 | EF-hand_5 | 14 | 37 | 6.4e-23 | 79.0 | 2.4e-09 | 1.8e-06 | 27.0 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 1 | EFhand_Ca_insen | 14 | 71 | 2.1e-07 | 30.8 | 0.38 | 280.0 | 1.5 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 1 | EF-hand_9 | 16 | 75 | 2.5e-16 | 59.3 | 4.9e-12 | 3.6e-09 | 36.3 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 1 | SPARC_Ca_bdg | 16 | 70 | 3.5e-07 | 30.2 | 6.4e-05 | 0.048 | 13.6 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 2 | EF-hand_8 | 25 | 75 | 4.0e-31 | 106.4 | 2.9e-16 | 2.1e-13 | 49.6 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 2 | EF-hand_1 | 48 | 75 | 2.5e-35 | 117.0 | 2.0e-10 | 1.5e-07 | 30.1 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 2 | EF-hand_6 | 48 | 75 | 3.0e-30 | 101.3 | 3.2e-07 | 0.00024 | 20.7 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 2 | EF-hand_5 | 49 | 73 | 6.4e-23 | 79.0 | 2.8e-06 | 0.0021 | 17.3 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 2 | EFhand_Ca_insen | 79 | 143 | 2.1e-07 | 30.8 | 9.1e-10 | 6.7e-07 | 29.1 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 2 | SPARC_Ca_bdg | 79 | 144 | 3.5e-07 | 30.2 | 2.7e-05 | 0.02 | 14.9 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 3 | EF-hand_8 | 82 | 99 | 4.0e-31 | 106.4 | 5.3e-05 | 0.04 | 13.5 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 3 | EF-hand_1 | 85 | 113 | 2.5e-35 | 117.0 | 9.0e-11 | 6.7e-08 | 31.2 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 3 | EF-hand_6 | 85 | 114 | 3.0e-30 | 101.3 | 6.1e-11 | 4.5e-08 | 32.3 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 2 | EF-hand_4 | 85 | 145 | 6.5e-09 | 35.4 | 1.0e-06 | 0.00078 | 19.1 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 2 | EF-hand_7 | 86 | 146 | 6.9e-33 | 112.5 | 4.5e-19 | 3.3e-16 | 59.1 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 3 | EF-hand_5 | 86 | 109 | 6.4e-23 | 79.0 | 1.7e-07 | 0.00013 | 21.1 |
| pfu_aug2.0_7114.1_16242.t1 | 2 | 2 | EF-hand_9 | 89 | 148 | 2.5e-16 | 59.3 | 2.6e-07 | 0.00019 | 21.2 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 4 | EF-hand_8 | 98 | 145 | 4.0e-31 | 106.4 | 8.3e-17 | 6.1e-14 | 51.3 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 4 | EF-hand_1 | 121 | 147 | 2.5e-35 | 117.0 | 7.1e-10 | 5.3e-07 | 28.4 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 4 | EF-hand_5 | 128 | 145 | 6.4e-23 | 79.0 | 3.0e-06 | 0.0023 | 17.2 |
| pfu_aug2.0_7114.1_16242.t1 | 4 | 4 | EF-hand_6 | 129 | 148 | 3.0e-30 | 101.3 | 2.1e-05 | 0.016 | 15.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7114.1_16242.t1 | gi|160358333|ref|NP_001103834.1| | neo-calmodulin [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7114.1_16242.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7114.1_16242.t1 atggcggaagatctcacagaagaacaaatcgcagagttccgagaggcgttccatctctttgacaaagatggcagtgggag tatatcagccgaagagctcggaacagtcatgagatcattaggtcaaaaccccaatgaacaggaattacaagatctcgtgg aagaaatcgacacagacggcaatggagaggttgatttcaacgagttcttggccatgatggctaagaaaatgaaagacacc gactcggaagaggaaattcgggaagccttcagagtgttcgatagggatgacaaagggtttattactgcttcagaattaaa acatataatgacgacactgggtgagaaaatggacgacgaagaagcagaagagatggtagcggctgcagatattgatggag atggagaaataaattatgaggagtttgtcaaaatgatttcaatgaaagacaccgatcaagaagaacagcaacaagaaagt aaatga |
|
Protein
| Protein ID | pfu_aug2.0_7114.1_16242.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7114.1_16242.t1 MAEDLTEEQIAEFREAFHLFDKDGSGSISAEELGTVMRSLGQNPNEQELQDLVEEIDTDGNGEVDFNEFLAMMAKKMKDT DSEEEIREAFRVFDRDDKGFITASELKHIMTTLGEKMDDEEAEEMVAAADIDGDGEINYEEFVKMISMKDTDQEEQQQES K |
|