Gene
| Gene Model ID | pfu_aug2.0_7148.1_29556 |
|---|---|
| Locus | scaffold7148.1 : 1 ... 11111 : - |
| To GenomeBrowser | scaffold7148.1:1..11111 |
| Genes list of scaffold | scaffold7148.1 |
| Synonym | pfu_aug1.0_303.1_36474 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7148.1_29556.t1 | 2 | 1 | Neur_chan_memb | 1 | 31 | 9.3e-16 | 58.4 | 2.5e-12 | 3.7e-08 | 33.5 |
| pfu_aug2.0_7148.1_29556.t1 | 2 | 2 | Neur_chan_memb | 69 | 187 | 9.3e-16 | 58.4 | 1.4e-09 | 2.0e-05 | 24.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7148.1_29556.t1 | gi|157954039|ref|NP_001103252.1| | nicotinic acetylcholine receptor alpha 5 subunit isoform 1 precursor [Tribolium castaneum] | 1.0e-15 |
| pfu_aug2.0_7148.1_29556.t1 | gi|524870915|ref|XP_005092237.1| | PREDICTED: acetylcholine receptor subunit beta-like [Aplysia californica] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_7148.1_29556.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7148.1_29556.t1 atgggaattacgacgctgttgtccatgacagtatttcttatgatagttgctgagcgtcttccacctgtttctgataccgt tcctctgattggagataaagacgttcctgacgacaatctcaacagcactagcaatagagcaccaaactcgaagaaagaag ctctaagtaccactggtgaggattcaatttccgaaatatgcatgtctagtacatcgataatgggtatttgtgtcctagat gatagtcttctttgtcggcagaaggtaccgacaggggactattactgctatgaggcagaacaagcggaagggacagaaaa tggtggcatatcacctagattcgccaggaaagtacgaacagttccaactgacttgtgtgaaaaacaattcatgcgcgtct tgcataaagtgaatcagacgatagaaagaaatgagatgagacttgcagaacaagacagaagagactatattaagcaggag tggcagcagcttgcgttagttgtggacaggttgttgatggtactttttaccatggtgctgatatgtgtgacgatgtcttt attagttcccggggacagttacagtggtactggggaggaattggtacaaaaacattag |
|
Protein
| Protein ID | pfu_aug2.0_7148.1_29556.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7148.1_29556.t1 MGITTLLSMTVFLMIVAERLPPVSDTVPLIGDKDVPDDNLNSTSNRAPNSKKEALSTTGEDSISEICMSSTSIMGICVLD DSLLCRQKVPTGDYYCYEAEQAEGTENGGISPRFARKVRTVPTDLCEKQFMRVLHKVNQTIERNEMRLAEQDRRDYIKQE WQQLALVVDRLLMVLFTMVLICVTMSLLVPGDSYSGTGEELVQKH |
|