Gene
| Gene Model ID | pfu_aug2.0_715.1_17754 |
|---|---|
| Locus | scaffold715.1 : 27526 ... 36943 : + |
| To GenomeBrowser | scaffold715.1:27526..36943 |
| Genes list of scaffold | scaffold715.1 |
| Synonym | pfu_aug1.0_5436.1_01995 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| metal regulatory transcription factor 1 | GO:0005634 GO:0005737 GO:0006355 GO:0044212 GO:0071276 GO:0071294 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_715.1_17754.t1 | 9 | 1 | zf-H2C2_2 | 104 | 119 | 7.1e-36 | 120.7 | 0.12 | 260.0 | 2.1 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 1 | zf-C2H2 | 106 | 130 | 3.1e-28 | 96.3 | 2.2e-07 | 0.00047 | 20.3 |
| pfu_aug2.0_715.1_17754.t1 | 8 | 1 | zf-C2H2_4 | 106 | 130 | 1.6e-15 | 56.2 | 2.4e-06 | 0.0051 | 17.0 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 2 | zf-H2C2_2 | 122 | 149 | 7.1e-36 | 120.7 | 6.5e-07 | 0.0014 | 18.8 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 2 | zf-C2H2 | 136 | 160 | 3.1e-28 | 96.3 | 1.4e-06 | 0.0029 | 17.8 |
| pfu_aug2.0_715.1_17754.t1 | 8 | 2 | zf-C2H2_4 | 136 | 160 | 1.6e-15 | 56.2 | 0.00012 | 0.25 | 11.7 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 3 | zf-H2C2_2 | 152 | 179 | 7.1e-36 | 120.7 | 6.6e-09 | 1.4e-05 | 25.1 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 3 | zf-C2H2 | 166 | 190 | 3.1e-28 | 96.3 | 1.6e-05 | 0.034 | 14.4 |
| pfu_aug2.0_715.1_17754.t1 | 8 | 3 | zf-C2H2_4 | 166 | 190 | 1.6e-15 | 56.2 | 0.00064 | 1.4 | 9.4 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 4 | zf-H2C2_2 | 183 | 208 | 7.1e-36 | 120.7 | 6.1e-07 | 0.0013 | 18.9 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 4 | zf-C2H2 | 195 | 219 | 3.1e-28 | 96.3 | 6.9e-08 | 0.00015 | 21.9 |
| pfu_aug2.0_715.1_17754.t1 | 8 | 4 | zf-C2H2_4 | 195 | 219 | 1.6e-15 | 56.2 | 3.3e-05 | 0.069 | 13.5 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 5 | zf-H2C2_2 | 211 | 225 | 7.1e-36 | 120.7 | 2.6e-06 | 0.0055 | 16.9 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 5 | zf-C2H2 | 224 | 234 | 3.1e-28 | 96.3 | 0.058 | 120.0 | 3.2 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 6 | zf-H2C2_2 | 227 | 252 | 7.1e-36 | 120.7 | 6.7e-07 | 0.0014 | 18.7 |
| pfu_aug2.0_715.1_17754.t1 | 8 | 5 | zf-C2H2_4 | 227 | 234 | 1.6e-15 | 56.2 | 7.0 | 15000.0 | -4.2 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 6 | zf-C2H2 | 239 | 263 | 3.1e-28 | 96.3 | 6.9e-08 | 0.00015 | 21.9 |
| pfu_aug2.0_715.1_17754.t1 | 8 | 6 | zf-C2H2_4 | 239 | 263 | 1.6e-15 | 56.2 | 3.3e-05 | 0.069 | 13.5 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 7 | zf-H2C2_2 | 255 | 281 | 7.1e-36 | 120.7 | 6.6e-11 | 1.4e-07 | 31.4 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 7 | zf-C2H2 | 271 | 293 | 3.1e-28 | 96.3 | 4.6e-07 | 0.00098 | 19.3 |
| pfu_aug2.0_715.1_17754.t1 | 8 | 7 | zf-C2H2_4 | 275 | 293 | 1.6e-15 | 56.2 | 0.00012 | 0.25 | 11.7 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 8 | zf-H2C2_2 | 285 | 312 | 7.1e-36 | 120.7 | 1.8e-09 | 3.8e-06 | 26.9 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 8 | zf-C2H2 | 299 | 323 | 3.1e-28 | 96.3 | 9.3e-06 | 0.02 | 15.2 |
| pfu_aug2.0_715.1_17754.t1 | 8 | 8 | zf-C2H2_4 | 299 | 323 | 1.6e-15 | 56.2 | 0.00014 | 0.3 | 11.5 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 9 | zf-H2C2_2 | 685 | 691 | 7.1e-36 | 120.7 | 7.0 | 15000.0 | -3.7 |
| pfu_aug2.0_715.1_17754.t1 | 9 | 9 | zf-C2H2 | 685 | 694 | 3.1e-28 | 96.3 | 1.6 | 3300.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_715.1_17754.t1 | gi|573887341|ref|XP_006631444.1| | PREDICTED: metal regulatory transcription factor 1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_715.1_17754.t1 | gi|23308647|ref|NP_694513.1| | metal regulatory transcription factor 1 [Danio rerio] | 0.0 |
| pfu_aug2.0_715.1_17754.t1 | gi|597771804|ref|XP_007249672.1| | PREDICTED: metal regulatory transcription factor 1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_715.1_17754.t1 | gi|543282579|ref|XP_005428739.1| | PREDICTED: metal regulatory transcription factor 1 [Geospiza fortis] | 0.0 |
| pfu_aug2.0_715.1_17754.t1 | gi|525021761|ref|XP_005058376.1| | PREDICTED: metal regulatory transcription factor 1 isoform X1 [Ficedula albicollis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_715.1_17754.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_715.1_17754.t1 atgaacagtacacttgaacttgatgaagacttgactgattatgacaaggactgctgtatgttagattctacaagtttgaa aatgaattcagaagaaagtcagcataaaaaaatcaccagtaacaaagatgagactggtgtgttcgcaagagataatgatt caaatagtggaggatacatacagcacactatttctgatgatcagattatgatgcagatcactcctggtacagatcttatg ccggaaaatccttcacatgcctacattactgtggaaagtgagaatcctaaaactcaagagaaagatatcaaaaggtttaa atgtgattacactggttgtactaggacctacagcactgctggaaatctgaaaactcacatgaaaacccatagaggagaat atacatttgtgtgtaaccagcctaattgtgggaagatgttcctgacttcatatagcttgaagatacatgtgcgggtccat accaaagaaaaaccatatgaatgttacatgcagggttgtagaaagtcttataatacattgtacagattgagagctcatca gcgtctacacacgggagagacatttaactgtgaggaggatggctgtaacaaatacttcaccactcagagtgacctacgta aacatactcgaacacatactggagaaaaaccatacttattgagagctcatcagcgtctacacacgggagagacatttaac tgtgaggaggatggctgtaacaaatacttcaccactcagagtgacctacgtaaacatactcgaacgcatactggagaaaa accatacttatgtgacacggatggatgtgggaaagcttttgctgccagtcatcatttgaaaactcacatcagaacacata caggtgagaagccttatgcatgtaaggaggacgggtgtaccagggccttcacgtcacctaatagcctgaaatcccataaa acaaagcatggaaaaacagatagtaatggggatacatgtactacaaaggagtcaaggacttgggagagtaaagatgagat gtatgacttcagtaacctggaggattatatcgcagaggacagcaccaactgtgtaagctatgagccaagaacagaaatcc cccagtcctttattacagacctcacagacacagagaactgtgcgttatgtgtccatcctggtagtgaggggacagaaaat atcctgagtataactcctcaaggtcctaggacggactctgccgtacctcagattgtgatggatggtaatcagctacagaa taatctgttagagatgccgttcgtaaacgcacagtcggtggtgatggatagcctatcacacgcgccaacggtaacactac ctattgtacaggatatacaaagcatgcaaaatatggtgccaaatctatctaccactcatgattcccaacctgtaaccata cccataacaaacaccatgcctaggggtgacgactcaatccaaactgtaacggcactaccaattctacagaccccagccaa tatcaaggatagtttggagggcaatgtgacagtgcagcattatttgataacaaaagttgtagcaaatacagcaggaggaa agcaagttaaatcagaaatccttgaactcacccctggtctcccgacagtatcgtctaacttggcaacacaagacgagtcg ggcagtgaccttaactttgctatggcccctgacagtagtcctttgccaaatggtcaaggtattgtcttatgtggcaatga tgtggctggttcatgcacgtcccttgaagctctacagcctagtctcactaatgccgaactgcccataccaccaacaatat gcaatattccacaaattgataattctctacaagctttcaatattcctacgaatcctgctagcgaagcacttcagcagaag ttggattcaggtaacaaatttgacctccctatcactgacgaggaaaattctttattagctgagctagaagaaaaccttat ttccaaatcacaatcaacaaaccaaagtgctgagggggaggaaaatgtacagacatgtgccaaatgtcacaccaactaca cacctgatgagagtaccaccaaggtgggtcctaagatcgtagagctgacattaagaacggagcacattcctatactcata gcagccaatcccgataaaccgatcaccatactgccttctccggagatggacggtaaatattcacggatcaaaatcaccac agagggaggtttgattgagctaccgtatggaaataatggggaaccagtcttaccaatacctaacgatgccactggtaata ctgcaagcaaacagactactatcttaaatacattagcttcatcaacaaatctgttggccgtgtcttcatcgtaa |
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Protein
| Protein ID | pfu_aug2.0_715.1_17754.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_715.1_17754.t1 MNSTLELDEDLTDYDKDCCMLDSTSLKMNSEESQHKKITSNKDETGVFARDNDSNSGGYIQHTISDDQIMMQITPGTDLM PENPSHAYITVESENPKTQEKDIKRFKCDYTGCTRTYSTAGNLKTHMKTHRGEYTFVCNQPNCGKMFLTSYSLKIHVRVH TKEKPYECYMQGCRKSYNTLYRLRAHQRLHTGETFNCEEDGCNKYFTTQSDLRKHTRTHTGEKPYLLRAHQRLHTGETFN CEEDGCNKYFTTQSDLRKHTRTHTGEKPYLCDTDGCGKAFAASHHLKTHIRTHTGEKPYACKEDGCTRAFTSPNSLKSHK TKHGKTDSNGDTCTTKESRTWESKDEMYDFSNLEDYIAEDSTNCVSYEPRTEIPQSFITDLTDTENCALCVHPGSEGTEN ILSITPQGPRTDSAVPQIVMDGNQLQNNLLEMPFVNAQSVVMDSLSHAPTVTLPIVQDIQSMQNMVPNLSTTHDSQPVTI PITNTMPRGDDSIQTVTALPILQTPANIKDSLEGNVTVQHYLITKVVANTAGGKQVKSEILELTPGLPTVSSNLATQDES GSDLNFAMAPDSSPLPNGQGIVLCGNDVAGSCTSLEALQPSLTNAELPIPPTICNIPQIDNSLQAFNIPTNPASEALQQK LDSGNKFDLPITDEENSLLAELEENLISKSQSTNQSAEGEENVQTCAKCHTNYTPDESTTKVGPKIVELTLRTEHIPILI AANPDKPITILPSPEMDGKYSRIKITTEGGLIELPYGNNGEPVLPIPNDATGNTASKQTTILNTLASSTNLLAVSSS |
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