Gene
| Gene Model ID | pfu_aug2.0_715.1_17758 |
|---|---|
| Locus | scaffold715.1 : 109615 ... 114615 : - |
| To GenomeBrowser | scaffold715.1:109615..114615 |
| Genes list of scaffold | scaffold715.1 |
| Synonym | pfu_aug1.0_1598.1_15535 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_715.1_17758.t1 | 1 | 1 | Peptidase_M20 | 83 | 346 | 6.1e-06 | 25.8 | 1.3e-09 | 9.7e-06 | 25.2 |
| pfu_aug2.0_715.1_17758.t1 | 1 | 1 | M20_dimer | 175 | 267 | 1.5e-08 | 34.3 | 3.6e-12 | 2.7e-08 | 33.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_715.1_17758.t1 | gi|676490199|ref|XP_009065191.1| | hypothetical protein LOTGIDRAFT_211007 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_715.1_17758.t1 | gi|641802412|ref|XP_005299768.2| | PREDICTED: peptidase M20 domain-containing protein 2 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_715.1_17758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_715.1_17758.t1 atggacaatttaaaacaagctacatgcgatgcaatagatgcagcatcgacctatctctatggtataagccaagatatatg gtcgaacccggagctgagctacaatgaacactacgctcatgacgtattgactagagttctggaggaaaaaggattttgcg tggaaaagaagtataagatagacatggcattccgagccaccataggatgtaaggagaatggaccacatgtcgttgttatt tgtgaatacgatgcattaccagagataggccatgcatgtggacataaccttatcgcagaatctggcgtggctgcagcact agggatacaagcggcctttatgaaggctgggagaccgttaggacttttgtcagtgttgggcacgcctgcagaggagggtg gaggaggtaaagtgagattgatcaaggaaggggtatttgacgatgtcaatgtagcaatgatgttacatccggcaccaatg gacagcagtcatgccgatttctttttggcagctaacttggtgaaagtaaaatacctcggaaaggcatcccatgctgcagc attcccttgggaggggataaacgccctggacgccgctgtcacgtgctaccagacaatctctaatctaagacaacaaatga agccaacatggagggtacatggtattattaccaatggcggggttaaaccaaacattattcccgaagaatcaaacatggag tttatcatacgtgctccaaccaaagccgaatttgacttgttgacaaagaaatgcctcgagtgttttaaaagtgcagcaaa agcgacaagttgtaaggttgaaataagcattggggaaagaccctacctcaacgtcatttcaaatcgccctctccaaaagg ctttctctagaaactgtgagttaatcggtttagggaatcactcgagcagtagtggctcgccgttaagtggatccacagat atgggtaacgtttcctatgtggtacccagtatacatccgtgcttctacatcggaagtgacgctgtcaaccacacaaggga gttcaccgcggctgcaggtgacccaaaggctcagcattacactctggcacagtctaaagctatggcaatgacggcaatag acgtattcaccaatcaacagctactacaagacatcaatgaaaggtttaaggaagacatctgttaa |
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Protein
| Protein ID | pfu_aug2.0_715.1_17758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_715.1_17758.t1 MDNLKQATCDAIDAASTYLYGISQDIWSNPELSYNEHYAHDVLTRVLEEKGFCVEKKYKIDMAFRATIGCKENGPHVVVI CEYDALPEIGHACGHNLIAESGVAAALGIQAAFMKAGRPLGLLSVLGTPAEEGGGGKVRLIKEGVFDDVNVAMMLHPAPM DSSHADFFLAANLVKVKYLGKASHAAAFPWEGINALDAAVTCYQTISNLRQQMKPTWRVHGIITNGGVKPNIIPEESNME FIIRAPTKAEFDLLTKKCLECFKSAAKATSCKVEISIGERPYLNVISNRPLQKAFSRNCELIGLGNHSSSSGSPLSGSTD MGNVSYVVPSIHPCFYIGSDAVNHTREFTAAAGDPKAQHYTLAQSKAMAMTAIDVFTNQQLLQDINERFKEDIC |
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