Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_7174.1_16247
Locus scaffold7174.1 : 1 ... 15008 : +
To GenomeBrowser scaffold7174.1:1..15008
Genes list of scaffold scaffold7174.1
Synonym pfu_aug1.0_18402.1_40057

Manual annotation
Annotation by Blast2GO
Annotation GO
fad synthase-like GO:0003824 GO:0006796 GO:0009108 GO:0018130 GO:0044238 GO:0090407 GO:1901362 GO:1901566

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_7174.1_16247.t1 1 1 MoCF_biosynth 1 155 7.4e-29 100.0 8.5e-33 1.3e-28 99.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_7174.1_16247.t1 gi|676475136|ref|XP_009060375.1| hypothetical protein LOTGIDRAFT_106425 [Lottia gigantea] 0.0
pfu_aug2.0_7174.1_16247.t1 gi|585677571|ref|XP_006819165.1| PREDICTED: FAD synthase-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_7174.1_16247.t1 gi|557001863|ref|XP_006003385.1| PREDICTED: FAD synthase [Latimeria chalumnae] 0.0
pfu_aug2.0_7174.1_16247.t1 gi|390366315|ref|XP_797921.3| PREDICTED: FAD synthase [Strongylocentrotus purpuratus] 0.0
pfu_aug2.0_7174.1_16247.t1 gi|363742801|ref|XP_003642709.1| PREDICTED: FAD synthase isoform X1 [Gallus gallus] 0.0

Transcript
Transcript IDpfu_aug2.0_7174.1_16247.t1
Definition-
>pfu_aug2.0_7174.1_16247.t1
tgattggtgatgagattcttaaaggacagactgcagatacaaattcccatttcttatgtaaacatctatactctcttgga
gtcagagtcaaaaggatttctgtgataccagatgaccttgacaccatcgcaaaagaagtgcaagatttctcaaaagctta
tacacatgtcattacctcaggtggcataggaccaacacatgatgatgtcacatttgaaggtgtggctaaagcatttgatg
atacagtttctccacatccagacattgtcaagctgtgcgtagagtactggggtgaaagcagtatggactcgcctaagatg
aagttagccatgattccaaagtcggctcgtttggtatacggggggaataagaaaacaggagagaaaaataaattcccgct
agtagtggtgaaaaatgtatatattttccctggagtcccttctataatggaaagagcttttgtggctctagaggacttat
tcaaaaatccaaatgctgaattccacacacgacaagtttttgtacaaagtgatgaagtttccatagcaccggtattgaat
gagattgacgctgaattcaagaaagtactcacactgggatcttaccctgattttcataacagttattacaaggtgaaact
ggtactggaggcagacacagaagaaacagtccagatggcacatgatacactggtacaaaaactacccaaaggttctgtgg
ttgactatgatcccagccctatactacacgcggcagacagagtatacagggtggtggactcgtgtgaacagtgtcagtac
acacaaaatgtacggaaagccgtcggcgtcatagaagaagcactcaacaaatacag

Protein
Protein IDpfu_aug2.0_7174.1_16247.t1
Definition-
>pfu_aug2.0_7174.1_16247.t1
IGDEILKGQTADTNSHFLCKHLYSLGVRVKRISVIPDDLDTIAKEVQDFSKAYTHVITSGGIGPTHDDVTFEGVAKAFDD
TVSPHPDIVKLCVEYWGESSMDSPKMKLAMIPKSARLVYGGNKKTGEKNKFPLVVVKNVYIFPGVPSIMERAFVALEDLF
KNPNAEFHTRQVFVQSDEVSIAPVLNEIDAEFKKVLTLGSYPDFHNSYYKVKLVLEADTEETVQMAHDTLVQKLPKGSVV
DYDPSPILHAADRVYRVVDSCEQCQYTQNVRKAVGVIEEALNKY

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495