Gene
| Gene Model ID | pfu_aug2.0_719.1_31096 |
|---|---|
| Locus | scaffold719.1 : 225120 ... 238838 : - |
| To GenomeBrowser | scaffold719.1:225120..238838 |
| Genes list of scaffold | scaffold719.1 |
| Synonym | pfu_aug1.0_8801.1_09837 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_719.1_31096.t1 | 4 | 1 | Calsarcin | 53 | 138 | 1.8e-06 | 27.3 | 0.3 | 4500.0 | -3.5 |
| pfu_aug2.0_719.1_31096.t1 | 4 | 2 | Calsarcin | 348 | 388 | 1.8e-06 | 27.3 | 0.00017 | 2.5 | 7.2 |
| pfu_aug2.0_719.1_31096.t1 | 4 | 3 | Calsarcin | 474 | 507 | 1.8e-06 | 27.3 | 2.0e-07 | 0.0029 | 16.8 |
| pfu_aug2.0_719.1_31096.t1 | 4 | 4 | Calsarcin | 521 | 629 | 1.8e-06 | 27.3 | 2.1e-05 | 0.32 | 10.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_719.1_31096.t1 | gi|676474221|ref|XP_009060074.1| | hypothetical protein LOTGIDRAFT_228966 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_719.1_31096.t1 | gi|524874969|ref|XP_005094216.1| | PREDICTED: uncharacterized protein LOC101862103 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_719.1_31096.t1 | gi|241621631|ref|XP_002408828.1| | hypothetical protein IscW_ISCW020576 [Ixodes scapularis] | 8.0e-29 |
| pfu_aug2.0_719.1_31096.t1 | gi|585684433|ref|XP_006812579.1| | PREDICTED: synaptopodin-2-like [Saccoglossus kowalevskii] | 7.0e-22 |
| pfu_aug2.0_719.1_31096.t1 | gi|391341448|ref|XP_003745042.1| | PREDICTED: uncharacterized protein LOC100909369 [Metaseiulus occidentalis] | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_719.1_31096.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_719.1_31096.t1 atggcacctgctcaagcccagcaacctgcacatgtggcgccatcttcacaagggaacattgtgtcgtctgcttccacaac ttattctgtgaaggagggtgataagcgaagaagtgtttctcaacacgaattcgaggaagccatgcagggcgggataaaat caaagacttttgttaagcacgaggagatcgtaaacaaaccatctccccgaatttcctctcaatcaagcatgcatgctatg agaagcgaggggcgatcagaaccaatgcagatctatgtacaggttgatgatcaaatgggtcataaagaaaacatttcacc aattccaaacaattttcagccacattcagcatcgagcccagttcccatgttttcagtcaaaaacataaaaagtcaactgc aatcacctgctcagccgccatcaatgacgtcacatcagtctgttgaacaacaacatggtcctactccatttcaagagcaa tcaagtaatatcccaatgttcagagtctccaaatttgaggcgcacaaattccaagagcgaccccagagagatgaaagcga ttttcccaaattcgatccatcggcgaatgttccactttctaatataccgccggctccaccagcgccaccactgccaccgt ctataccaagagaagtgaatcccgacgaaccgatgttatttccggttcccaaatatacgtcgcaaatgttacgacaggat gcgcttgaaaggtcaagatatgaccttgacagcgatgaggaggaggaggagcatccggaccatctaccgatctttgctcc tcctgttcagtttactgcagaggagcgtgctcttatggacagcggatatgacgaaaatctgttaacaccaagaagtgtag agaggccgaccgacctcccggatttagacattcagagcggcgcggagagtgaccatgtacctggtactccagaaactggg tcaacgggtgttcgaaaaaagaagaaacttttctcggactcggccttctacgatgatcccgatgcgcattacccgaccat cgaggagcaaatggatctgtgtaagaagattgccaaatcgctgacgtctgcagccaataagaaagcacgaggcgctcgga tgtttgccaagcgcaagcgaaagtcagggaggtggatacatgacggtgagttctgtcacggatcgtcatccgcgggcgat gtggcggacctacgcgaccttgagagcgaattaaatcccgaggagggaggaactaaacctcttttctcattccggatacc aaatctagcaaaacggattaattacgaatttgaagaaaaaatgagtctgtctccagatgaatttgagaggcttcgcctag gcaaggataaagtcgatcaccgatcggtatctcctaatacttgccataatttagtgatggatttgcagtctcccagaaac aggggcgcaaaactttttcaaaaacgtgccgctcgttctgaaaaatgggtgatcgacgaaacaaatgcggccaaaccgcc accgcccaggcttcaaaacatggtctcaagtccggcgaagtcaatgctctctccttgggaagcggcctcggaaaatccca ttggaagcgtagaaaaggcttttgaacatcttgacggtgcggataaactccgagaagtcaaccaaactttcaaacaacaa caacaacaatggcggctaccgcaaccccctatgcatcaccctatgcatcctcctatgaccacgccttatcaacagaccgt cactacgacacagaaaattcactcacttaaaacgtccgagaagcctaatgtcattggagggcctaattataacagattgg ctaaaggatggcaaacatcgtcaaacactggctcgtattctagttcacagtatcctcatggacaacagcattttcagact tttagacaggaaccgccgccccctcccccgcccatcaaacccctgaagcaacaggacaattacgatcggtcggtctcctc ctacagtcaaggccctcacggtcacactaggagcacaacctctacgtctcaccacacgacgccttatggcggcggctacg gtcaacctcaaggttacacaactacggactcgtataattatcaaatgacggcggtttccgatttctaa |
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Protein
| Protein ID | pfu_aug2.0_719.1_31096.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_719.1_31096.t1 MAPAQAQQPAHVAPSSQGNIVSSASTTYSVKEGDKRRSVSQHEFEEAMQGGIKSKTFVKHEEIVNKPSPRISSQSSMHAM RSEGRSEPMQIYVQVDDQMGHKENISPIPNNFQPHSASSPVPMFSVKNIKSQLQSPAQPPSMTSHQSVEQQHGPTPFQEQ SSNIPMFRVSKFEAHKFQERPQRDESDFPKFDPSANVPLSNIPPAPPAPPLPPSIPREVNPDEPMLFPVPKYTSQMLRQD ALERSRYDLDSDEEEEEHPDHLPIFAPPVQFTAEERALMDSGYDENLLTPRSVERPTDLPDLDIQSGAESDHVPGTPETG STGVRKKKKLFSDSAFYDDPDAHYPTIEEQMDLCKKIAKSLTSAANKKARGARMFAKRKRKSGRWIHDGEFCHGSSSAGD VADLRDLESELNPEEGGTKPLFSFRIPNLAKRINYEFEEKMSLSPDEFERLRLGKDKVDHRSVSPNTCHNLVMDLQSPRN RGAKLFQKRAARSEKWVIDETNAAKPPPPRLQNMVSSPAKSMLSPWEAASENPIGSVEKAFEHLDGADKLREVNQTFKQQ QQQWRLPQPPMHHPMHPPMTTPYQQTVTTTQKIHSLKTSEKPNVIGGPNYNRLAKGWQTSSNTGSYSSSQYPHGQQHFQT FRQEPPPPPPPIKPLKQQDNYDRSVSSYSQGPHGHTRSTTSTSHHTTPYGGGYGQPQGYTTTDSYNYQMTAVSDF |
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