Gene
| Gene Model ID | pfu_aug2.0_7199.1_32938 |
|---|---|
| Locus | scaffold7199.1 : 11446 ... 14904 : + |
| To GenomeBrowser | scaffold7199.1:11446..14904 |
| Genes list of scaffold | scaffold7199.1 |
| Synonym | pfu_aug1.0_16856.1_69012 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7199.1_32938.t1 | 1 | 1 | RVT_1 | 295 | 433 | 3.8e-20 | 72.1 | 1.2e-23 | 9.1e-20 | 70.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7199.1_32938.t1 | gi|591378210|ref|XP_007063662.1| | PREDICTED: uncharacterized protein LOC102929704 [Chelonia mydas] | 1.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_7199.1_32938.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7199.1_32938.t1 atgattacctcgtatctcgatagagttgtatcgaatgacgaacgagctgaagcacttcaagctcttagtcatgtgtttca ttctatggctcatgtcacgtcccgaagtttggtatcttcagtgacatctcatagaggtttatacttgcaggatatggcct ttaaaaatagtgcaactgaaaacaaactgcttacgttatccacattggggtcctcacttttttatggaaaattctttgac attcttcactcgagtgcagagaatattcgagatgctaaggagacccagcatctacacaataccaaattctctgcaaacac tagtaatgaagctagaaagagaaaacgggatgatgtttctaatgaaaaaactgatcatgtgtctcagtactcaaataaga agccccgatcagattctagttacactccgaacgggatagggtcatctgataaatctaagcatcagttaaagcagcgaagt tcgtattatacccctcgtcgtcagggaaacaattttcgctcgggcttcgcccctcaaagtaaggaatcgggacacttttg cctgtcttccagtagaggagaggttacaacatttcaaatcagcttggaaattgattacccaagacgaatggattctagat gtagtccaggcaggactaaaattgattttcaaggagtttccaaggattctgctatttccgtggcagatggccgtcctaag tcggcaccggttgcccattggtctcacgaggttcgcgttttcttagaaagaaatgtagtggaactagttcccttgggcca ggaaggccagggtttttacagtacgttttttgttgtaaagaaaaaagacgaaagataccgtccaattttgaatctccagg tgccccacttcaagatggagacacataaatcagttacagcaagtctacgaagaggcgaatgggcattcactctggacttg aaagatgcataccttcacattcctgtatttcaaccacatcggaagtgccaccgtttttgtgttcaagggcatcactacca atttcgagcaatgccgtttggtttggctacagctccccgaatattcaccaaagtgatgtcagcagtagggagttttctac actctcgtcaaatatttatacatatgtacctggacgattggttggtacgtcatcaggatgtggagacactactaaggcac caggactttattttggaactattggaccgtctcggtctcattatgaattacgagaagtctcattttatgccaacgcggaa aattcagtatctgggagcatcgttcaatctgcaatcaggcatcctttgcccatcaaaggaccggtacatgagtctgctcc ag |
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Protein
| Protein ID | pfu_aug2.0_7199.1_32938.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7199.1_32938.t1 MITSYLDRVVSNDERAEALQALSHVFHSMAHVTSRSLVSSVTSHRGLYLQDMAFKNSATENKLLTLSTLGSSLFYGKFFD ILHSSAENIRDAKETQHLHNTKFSANTSNEARKRKRDDVSNEKTDHVSQYSNKKPRSDSSYTPNGIGSSDKSKHQLKQRS SYYTPRRQGNNFRSGFAPQSKESGHFCLSSSRGEVTTFQISLEIDYPRRMDSRCSPGRTKIDFQGVSKDSAISVADGRPK SAPVAHWSHEVRVFLERNVVELVPLGQEGQGFYSTFFVVKKKDERYRPILNLQVPHFKMETHKSVTASLRRGEWAFTLDL KDAYLHIPVFQPHRKCHRFCVQGHHYQFRAMPFGLATAPRIFTKVMSAVGSFLHSRQIFIHMYLDDWLVRHQDVETLLRH QDFILELLDRLGLIMNYEKSHFMPTRKIQYLGASFNLQSGILCPSKDRYMSLLQ |
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