Gene
| Gene Model ID | pfu_aug2.0_720.1_01079 |
|---|---|
| Locus | scaffold720.1 : 146946 ... 181042 : - |
| To GenomeBrowser | scaffold720.1:146946..181042 |
| Genes list of scaffold | scaffold720.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_720.1_01079.t1 | 1 | 1 | PLAC8 | 55 | 142 | 1.2e-12 | 48.3 | 1.3e-16 | 1.9e-12 | 47.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_720.1_01079.t1 | gi|291221417|ref|XP_002730715.1| | PREDICTED: cornifelin-like isoform X1 [Saccoglossus kowalevskii] | 6.0e-17 |
| pfu_aug2.0_720.1_01079.t1 | gi|676490020|ref|XP_009065134.1| | hypothetical protein LOTGIDRAFT_229551 [Lottia gigantea] | 2.0e-16 |
| pfu_aug2.0_720.1_01079.t1 | gi|585702043|ref|XP_006822994.1| | PREDICTED: cell number regulator 4-like [Saccoglossus kowalevskii] | 1.0e-15 |
| pfu_aug2.0_720.1_01079.t1 | gi|585644396|ref|XP_006813856.1| | PREDICTED: placenta-specific gene 8 protein-like [Saccoglossus kowalevskii] | 3.0e-15 |
| pfu_aug2.0_720.1_01079.t1 | gi|260827609|ref|XP_002608757.1| | hypothetical protein BRAFLDRAFT_73978 [Branchiostoma floridae] | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_720.1_01079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_720.1_01079.t1 atgcagcaacctaccccaagagcaacaacagtcgttatgcagcaacctaccccaagagcaacaacagttgtaacgcagca accgactagtagtgcaacaacaatgatgcagcaaggacaaggcggtttaggaccatttgtgcctcttaacggtaacagag actggtcaactggactgttcgaatcatttagtcaagagaattcatcttgtttaaaaactttctgctgtatccctttcacg atatgttacttgtcaaagagaatgggggagcacttactcctgccatacttctacccaggcgctggcgtggttgccatgag gacgaaaatacggatagtgggcggaatacgtggtacaatacttggcgattgttgtacaacgatgtggtgctcagaatgtg ccataagacaattagaaagagaaatggatgcaatgaatatcaagtag |
|
Protein
| Protein ID | pfu_aug2.0_720.1_01079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_720.1_01079.t1 MQQPTPRATTVVMQQPTPRATTVVTQQPTSSATTMMQQGQGGLGPFVPLNGNRDWSTGLFESFSQENSSCLKTFCCIPFT ICYLSKRMGEHLLLPYFYPGAGVVAMRTKIRIVGGIRGTILGDCCTTMWCSECAIRQLEREMDAMNIK |
|