Gene
| Gene Model ID | pfu_aug2.0_720.1_01080 |
|---|---|
| Locus | scaffold720.1 : 205803 ... 226968 : + |
| To GenomeBrowser | scaffold720.1:205803..226968 |
| Genes list of scaffold | scaffold720.1 |
| Synonym | pfu_aug1.0_90320.1_06146 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_720.1_01080.t1 | 4 | 1 | PAN_1 | 13 | 70 | 2.2e-27 | 94.6 | 7.0e-09 | 1.7e-05 | 24.4 |
| pfu_aug2.0_720.1_01080.t1 | 4 | 2 | PAN_1 | 77 | 146 | 2.2e-27 | 94.6 | 5.3e-13 | 1.3e-09 | 37.6 |
| pfu_aug2.0_720.1_01080.t1 | 4 | 3 | PAN_1 | 174 | 214 | 2.2e-27 | 94.6 | 8.0e-10 | 2.0e-06 | 27.4 |
| pfu_aug2.0_720.1_01080.t1 | 4 | 4 | PAN_1 | 250 | 288 | 2.2e-27 | 94.6 | 2.7e-06 | 0.0068 | 16.1 |
| pfu_aug2.0_720.1_01080.t1 | 3 | 1 | CUB | 289 | 362 | 4.6e-33 | 113.5 | 1.4e-07 | 0.00034 | 20.6 |
| pfu_aug2.0_720.1_01080.t1 | 3 | 2 | CUB | 368 | 480 | 4.6e-33 | 113.5 | 1.5e-29 | 3.7e-26 | 91.3 |
| pfu_aug2.0_720.1_01080.t1 | 3 | 3 | CUB | 489 | 534 | 4.6e-33 | 113.5 | 0.16 | 410.0 | 1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_720.1_01080.t1 | gi|524871092|ref|XP_005092322.1| | PREDICTED: uncharacterized protein LOC101848270 [Aplysia californica] | 0.0 |
| pfu_aug2.0_720.1_01080.t1 | gi|676435598|ref|XP_009047609.1| | hypothetical protein LOTGIDRAFT_66938, partial [Lottia gigantea] | 8.00001e-41 |
| pfu_aug2.0_720.1_01080.t1 | gi|524871154|ref|XP_005092353.1| | PREDICTED: cubilin-like [Aplysia californica] | 8.0e-34 |
| pfu_aug2.0_720.1_01080.t1 | gi|466050563|ref|XP_004278261.1| | PREDICTED: procollagen C-endopeptidase enhancer 2 isoform X1 [Orcinus orca] | 2.0e-20 |
| pfu_aug2.0_720.1_01080.t1 | gi|466050568|ref|XP_004278262.1| | PREDICTED: procollagen C-endopeptidase enhancer 2 isoform X2 [Orcinus orca] | 2.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_720.1_01080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_720.1_01080.t1 atgccgctcttacgactcactgcgatacccatcagaagcatcaagaatgtcttaccggaagattgtgctcgcgcatgcgt actggagacgtcttttgagtgtaaatcttttgatattgagtttacaacgaagacttgtcgcctacagaatcattcgcatg aggaaccattcttcactcttcaagtgtcaacgtctgttgatcattatagacccaactacgaaagattattccagagaatc cctaaccacatcctgactttcgatcatcaacgtaagattcctggtgtaaccgtagaacaatgcgccaggagatgcatcgt agaaaccgctttcaagtgtatggggtttgattttgaaagcaaacttcagaattgttggttaacgaagaagacaactcaga gcgaaggcattatgaagcaaagcggtagcgatttctatgaaagaaaaacagagggcccaatggaaaacttcttcaatttt ggatatggccgaatgcagcaaatcgagggcgaacatgtgtataacaagattgtaattggtgtgacgcagcaggcatgcgc acagctctgtttggcagagacagctttccgttgccatagtttcgactttgtattcgaggataattcatgtcacatgagtc agtatatggcagcaaatgtgtatggtttagacatttcgctcaaagacgaaaagaaagttattcattttgaggtaaaagat gaatacctttcaaagttttacgctaccccctacacggctgtcttaggacacaacgagagaacatatcacaaggtcacacc aagtagctgtgccagacgctgtcttcatgagagaatgtttgtatgcagatcttttgactatcagataatcgttttaaaat tcattcatttcgacttaggatccgggaattcagaaccttgtaagagcgacacagactatatctttgtgtcggagtggacg tcaaacaatcaatccaaaacgtgcttgacgaagggaaacaacgaatatacaagttacactaataatctgaccttgacatt tatttccaatttaaagaatgatagtcaaggattcagagtgttttaccattcagattggccatgtggtgggacacttacta acaacaatggtcagctttcctcgcctaactggcctggttcctaccctgcatcggcttcctgcatctggaaaatccttgct cctaaaggcgccaaaattcaagtaaattttgtatcacttgacctcgagcaacatatgagtggaaattgtatctcggcata cgattctgtttatattttcgaaaataaaaatatatcaaactttgagagaactttttgtggatattcaaagggagaagaca ttacatctaccggtaatgatctttatatttcttttcgaagtgacgcaagagtgcaacgtagcggattccatgctatttat agatttcttttaccggaaacaacgtcattgcaaacgacggagtttgtgcaaaagactacaacgctacctccggtgtcatt cgagatagacagaaatcagtcaaaggaaattcatatgaccttgagagcaatgtttatagagaatagacgccagaatccga aatctaaaaatttgttgagacatgattcaaatgaaaatagaacaacgactatcccatcatacaacaaaggtggtggtgat ttttcgttggtgacacaagagaaccctgaagtaatcaccgtggaaaccaattttagacgagcccttatcatcctggtggc cgttttcttcttcatctttatcattattgttttgattatagtgcttatatgccggtattatagaaaacgtattccaaaga gaagaagcgtgccaaattttccatttaatgaggagaatgtatcgttatacgataaagacaatgcactgaacaaggaagta cagaaggagcacgaagattcggagagcatcaatctacctcagccaaggttataa |
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Protein
| Protein ID | pfu_aug2.0_720.1_01080.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_720.1_01080.t1 MPLLRLTAIPIRSIKNVLPEDCARACVLETSFECKSFDIEFTTKTCRLQNHSHEEPFFTLQVSTSVDHYRPNYERLFQRI PNHILTFDHQRKIPGVTVEQCARRCIVETAFKCMGFDFESKLQNCWLTKKTTQSEGIMKQSGSDFYERKTEGPMENFFNF GYGRMQQIEGEHVYNKIVIGVTQQACAQLCLAETAFRCHSFDFVFEDNSCHMSQYMAANVYGLDISLKDEKKVIHFEVKD EYLSKFYATPYTAVLGHNERTYHKVTPSSCARRCLHERMFVCRSFDYQIIVLKFIHFDLGSGNSEPCKSDTDYIFVSEWT SNNQSKTCLTKGNNEYTSYTNNLTLTFISNLKNDSQGFRVFYHSDWPCGGTLTNNNGQLSSPNWPGSYPASASCIWKILA PKGAKIQVNFVSLDLEQHMSGNCISAYDSVYIFENKNISNFERTFCGYSKGEDITSTGNDLYISFRSDARVQRSGFHAIY RFLLPETTSLQTTEFVQKTTTLPPVSFEIDRNQSKEIHMTLRAMFIENRRQNPKSKNLLRHDSNENRTTTIPSYNKGGGD FSLVTQENPEVITVETNFRRALIILVAVFFFIFIIIVLIIVLICRYYRKRIPKRRSVPNFPFNEENVSLYDKDNALNKEV QKEHEDSESINLPQPRL |
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