Gene
| Gene Model ID | pfu_aug2.0_720.1_01081 |
|---|---|
| Locus | scaffold720.1 : 233397 ... 248166 : - |
| To GenomeBrowser | scaffold720.1:233397..248166 |
| Genes list of scaffold | scaffold720.1 |
| Synonym | pfu_aug1.0_8281.1_60402 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| exostosin-like 3 | GO:0001888 GO:0005789 GO:0006024 GO:0006987 GO:0015012 GO:0016021 GO:0030307 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_720.1_01081.t1 | 2 | 1 | Glyco_transf_64 | 46 | 98 | 4.62428e-44 | 150.4 | 5.9e-21 | 4.4e-17 | 62.0 |
| pfu_aug2.0_720.1_01081.t1 | 2 | 2 | Glyco_transf_64 | 167 | 260 | 4.62428e-44 | 150.4 | 2.4e-29 | 1.8e-25 | 89.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_720.1_01081.t1 | gi|1945402|gb|AAB93670.1| | EXTL3, partial [Homo sapiens] | 1.0e-39 |
| pfu_aug2.0_720.1_01081.t1 | gi|564386807|ref|XP_006252285.1| | PREDICTED: exostosin-like 3 [Rattus norvegicus] | 1.0e-39 |
| pfu_aug2.0_720.1_01081.t1 | gi|555991877|ref|XP_005907718.1| | PREDICTED: exostosin-like 3-like [Bos mutus] | 3.0e-39 |
| pfu_aug2.0_720.1_01081.t1 | gi|51476988|emb|CAH18440.1| | hypothetical protein [Homo sapiens] | 4.0e-39 |
| pfu_aug2.0_720.1_01081.t1 | gi|558220351|ref|XP_006135646.1| | PREDICTED: exostosin-like 3-like [Pelodiscus sinensis] | 4.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_720.1_01081.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_720.1_01081.t1 cacaaaatcgataaatcagaaaccgaaggcatacaaaatcaggacaaaacaggaaccaaagcaaacaaacaaaaacctcc accatatcaaaagaagcgaactcccgatatgggagtgagaccaggtgcccaggaagaggtatggagagaagagagggaac gaattgttggtttccctggacgatttcatgcctgggataacaattcaaaaacctggtattacaacgctaattatagctgt gaactttccatggttctaacgggtgcagcattctttcataagaccgttgtagatcactctaagcaagaaaacagatggga gcaagatgatacaatgtacatcacatctgagaaagtccgctctatcaattgtgctatgatacccctttctcgaatgttct cttcgggtgcggctatccaaacaggggatgcttactcctcccaggcatctgatcccttctccagcttgccaggggtccgt cgatgctcaatgtggtgctctatttattattcctacatgtatactcatgttatgccacaagccatcggagataaggtgga tgaatacattaactgtgaggacatagctatggatttcctggtgtcccatatcacaaggaaaccaccactcaaggtgacgc ctcaacatacattcctctgtcctgactgtccaaagactctgtctggtgatactcatcactttgaggagagacacaattgt gtgaacttctttatgcgagtgtacgtctacatgccacctctctatactcagtacaaatatacatgtttcaaattaactta a |
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Protein
| Protein ID | pfu_aug2.0_720.1_01081.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_720.1_01081.t1 HKIDKSETEGIQNQDKTGTKANKQKPPPYQKKRTPDMGVRPGAQEEVWREERERIVGFPGRFHAWDNNSKTWYYNANYSC ELSMVLTGAAFFHKTVVDHSKQENRWEQDDTMYITSEKVRSINCAMIPLSRMFSSGAAIQTGDAYSSQASDPFSSLPGVR RCSMWCSIYYSYMYTHVMPQAIGDKVDEYINCEDIAMDFLVSHITRKPPLKVTPQHTFLCPDCPKTLSGDTHHFEERHNC VNFFMRVYVYMPPLYTQYKYTCFKLT |
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