Gene
| Gene Model ID | pfu_aug2.0_7205.1_19572 |
|---|---|
| Locus | scaffold7205.1 : 1 ... 7137 : + |
| To GenomeBrowser | scaffold7205.1:1..7137 |
| Genes list of scaffold | scaffold7205.1 |
| Synonym | pfu_aug1.0_9498.1_02757 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 35 member b1 | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7205.1_19572.t1 | 2 | 1 | UAA | 11 | 138 | 0.0 | 215.5 | 5.4e-38 | 1.0e-34 | 119.8 |
| pfu_aug2.0_7205.1_19572.t1 | 2 | 1 | EamA | 17 | 119 | 2.3e-12 | 47.0 | 7.0e-09 | 1.3e-05 | 25.2 |
| pfu_aug2.0_7205.1_19572.t1 | 2 | 1 | EmrE | 25 | 122 | 1.1e-08 | 35.2 | 9.7e-09 | 1.8e-05 | 24.9 |
| pfu_aug2.0_7205.1_19572.t1 | 2 | 1 | TPT | 56 | 120 | 3.0e-09 | 36.6 | 0.003 | 5.5 | 6.6 |
| pfu_aug2.0_7205.1_19572.t1 | 2 | 2 | UAA | 154 | 264 | 0.0 | 215.5 | 2.9e-32 | 5.5e-29 | 101.0 |
| pfu_aug2.0_7205.1_19572.t1 | 2 | 2 | EmrE | 176 | 256 | 1.1e-08 | 35.2 | 1.2e-05 | 0.022 | 14.9 |
| pfu_aug2.0_7205.1_19572.t1 | 2 | 2 | EamA | 179 | 255 | 2.3e-12 | 47.0 | 1.7e-09 | 3.1e-06 | 27.2 |
| pfu_aug2.0_7205.1_19572.t1 | 2 | 2 | TPT | 183 | 255 | 3.0e-09 | 36.6 | 1.2e-11 | 2.2e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7205.1_19572.t1 | gi|676481901|ref|XP_009062526.1| | hypothetical protein LOTGIDRAFT_128290 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_7205.1_19572.t1 | gi|213514100|ref|NP_001133878.1| | Solute carrier family 35 member B1 [Salmo salar] | 0.0 |
| pfu_aug2.0_7205.1_19572.t1 | gi|704559683|ref|XP_010182327.1| | PREDICTED: solute carrier family 35 member B1, partial [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_7205.1_19572.t1 | gi|723127153|ref|XP_010279765.1| | PREDICTED: solute carrier family 35 member B1, partial [Phaethon lepturus] | 0.0 |
| pfu_aug2.0_7205.1_19572.t1 | gi|699697935|ref|XP_009890520.1| | PREDICTED: solute carrier family 35 member B1 [Charadrius vociferus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7205.1_19572.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7205.1_19572.t1 aaccaaaggaaagtatggggaaggggaaaagcaagagaagttcaaatacactctatctttagtcttcattcaatgcatta ttaatgctattgcagcaaaaatagctatgtacttatggcagaaggagagagaccagacacctagtcgtatgtacactata tgttccctgtcatatctaggagctatgttagccagtaatcatgcacttcaacacgtcagctatccaactcaggtacttgg aaagtcagccaagccgattccggtgatgatattaggaattttattcgccaggaagcgttacccacctctcaaatttctct ttgtaacaatgatagtgattggtgtagcattatttctatataaagacaataaagcgtcagcaaaagtagaaaatacctca ttgtttggatttnctatgagatgctgctctcatggacgtttcttgattttctttagtagatattcacatctctctgttgt atgtcttcaacagataggtttgacgttgacaggggagggattagctttcctagaattctttgagagacatccatcaattt tacctaaaatgatcacatttggtttggccagtgcagctggacagatgttcatatttgtcaccgtcacatcattcggacca ctaacgtgttcaatcgtcacgacgacgagaaaattcttcaccattctagcctccgtcataattttccagaaccccatgta tacacgacaatggatagggacagttttagtgtttatgggactcggtttagacagcgtgtacggcaaggagaagaagaaca aataa |
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Protein
| Protein ID | pfu_aug2.0_7205.1_19572.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7205.1_19572.t1 TKGKYGEGEKQEKFKYTLSLVFIQCIINAIAAKIAMYLWQKERDQTPSRMYTICSLSYLGAMLASNHALQHVSYPTQVLG KSAKPIPVMILGILFARKRYPPLKFLFVTMIVIGVALFLYKDNKASAKVENTSLFGFXMRCCSHGRFLIFFSRYSHLSVV CLQQIGLTLTGEGLAFLEFFERHPSILPKMITFGLASAAGQMFIFVTVTSFGPLTCSIVTTTRKFFTILASVIIFQNPMY TRQWIGTVLVFMGLGLDSVYGKEKKNK |
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