Gene
| Gene Model ID | pfu_aug2.0_7288.1_29567 |
|---|---|
| Locus | scaffold7288.1 : 4 ... 8795 : + |
| To GenomeBrowser | scaffold7288.1:4..8795 |
| Genes list of scaffold | scaffold7288.1 |
| Synonym | pfu_aug1.0_2402.1_66310 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7288.1_29567.t1 | 3 | 1 | HYR | 185 | 198 | 1.8e-13 | 50.2 | 0.32 | 4800.0 | -2.4 |
| pfu_aug2.0_7288.1_29567.t1 | 3 | 2 | HYR | 256 | 270 | 1.8e-13 | 50.2 | 0.0045 | 66.0 | 3.6 |
| pfu_aug2.0_7288.1_29567.t1 | 3 | 3 | HYR | 272 | 348 | 1.8e-13 | 50.2 | 1.2e-15 | 1.8e-11 | 43.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7288.1_29567.t1 | gi|390361783|ref|XP_782582.3| | 1.0e-09 | |
| pfu_aug2.0_7288.1_29567.t1 | gi|449676197|ref|XP_002162576.2| | 2.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_7288.1_29567.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7288.1_29567.t1 atgatcgtcatttgtggtccatggggtctacaaatcttcaggtatcgactgaacgctatcacactcaaaacgaaggcgga aattgacgtcataaaccacatcatgaaccatgatgcacggcacaaaaggtccgacggaaatgctaatgaatatgtatttt caaaaattgaatacacacatatgaccacacaagcagttatatcggccacagctaagacggatttaccaagttgtgatggt ctaccgtacaactcaaatccgagtctttgtgagtatataggttgtaggactaactctgactgcacgtcagcagaggtctg ctgttctaggaatgggacctcccaatgtcacaccacagtccgattctacttccagaattgcctctacaacggcaaatatt acgatgtcggttccgtctttgtcggtaataacggagtttattgccgttgtggtcaaggtatactgcatggagaaattata tgtagtgccaccgtgaagtctaaacatgctgatatatgtaaggcacctgatgacagtcaccatccaaatactacacaaga accttacattgggaactgtcctaatgctgatcagtcggtgatagtgcgcattcaggaggataagaacatagggtacctga cacatcaattccatgtaaccgactggcacggcagggttttggcgtacttagtcattcaggaaatttaccatatatgtaac tgtacgcatcaacctctctatgaaaacatggccatatcagaacctgatgaatatggtaataaagctgtttgctgttttaa agtcattgtagaagatatatatcctcctgtttttcgtacttgtccggagaatagaatggtcagcagtggtcagtctgttt cttggatacagccacacgtttgggacaatgtaggggtcaagaatttgaccatgacacccaaaattaaaagtggtgcagtg tggcgtccagggatatacatggtggaatacgcagccgtggactggtccggtaacagggcgtattgtcaatttagtgtcac agtattagcctcctctataatcagcattatggcaatagcagtgttggttgttggagcactcaccattagaaaatgtcgcc aaggaagtcgtctgcaagcaaacaacagttttctcagcagactccgagctgaaagaattcgacgtggacatagtttcgga tctggcggtaatgacaacgcggtatttactgtttacgactctgagccaccaccgtatgatattgccgtcagagataaatt accggactatatttcctcagattctcctccgccatatgaaagcacatcaagcgatgaacaaaccggaagttcaacaatat ctggtatcgcatcgaacgcgactgtttgtgataattctcaaagtgaatatacattacgaaatgatggtgcatctcagacc gaaaacgctcaaaattcaaacagaagttcgattgttaacgttgtcaatccagattctatccatacggttgtgtaa |
|
Protein
| Protein ID | pfu_aug2.0_7288.1_29567.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7288.1_29567.t1 MIVICGPWGLQIFRYRLNAITLKTKAEIDVINHIMNHDARHKRSDGNANEYVFSKIEYTHMTTQAVISATAKTDLPSCDG LPYNSNPSLCEYIGCRTNSDCTSAEVCCSRNGTSQCHTTVRFYFQNCLYNGKYYDVGSVFVGNNGVYCRCGQGILHGEII CSATVKSKHADICKAPDDSHHPNTTQEPYIGNCPNADQSVIVRIQEDKNIGYLTHQFHVTDWHGRVLAYLVIQEIYHICN CTHQPLYENMAISEPDEYGNKAVCCFKVIVEDIYPPVFRTCPENRMVSSGQSVSWIQPHVWDNVGVKNLTMTPKIKSGAV WRPGIYMVEYAAVDWSGNRAYCQFSVTVLASSIISIMAIAVLVVGALTIRKCRQGSRLQANNSFLSRLRAERIRRGHSFG SGGNDNAVFTVYDSEPPPYDIAVRDKLPDYISSDSPPPYESTSSDEQTGSSTISGIASNATVCDNSQSEYTLRNDGASQT ENAQNSNRSSIVNVVNPDSIHTVV |
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