Gene
| Gene Model ID | pfu_aug2.0_73.1_10225 |
|---|---|
| Locus | scaffold73.1 : 204862 ... 215069 : + |
| To GenomeBrowser | scaffold73.1:204862..215069 |
| Genes list of scaffold | scaffold73.1 |
| Synonym | pfu_aug1.0_2433.1_08324 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_73.1_10225.t1 | 1 | 1 | Homeobox | 152 | 208 | 8.0e-23 | 79.8 | 4.1e-26 | 1.2e-22 | 79.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_73.1_10225.t1 | gi|736232513|ref|XP_010782776.1| | PREDICTED: homeobox protein Hox-C4 [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_73.1_10225.t1 | gi|597740285|ref|XP_007232301.1| | PREDICTED: homeobox protein Hox-B4a-like isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_73.1_10225.t1 | gi|18858835|ref|NP_571193.1| | homeobox protein Hox-B4a [Danio rerio] | 0.0 |
| pfu_aug2.0_73.1_10225.t1 | gi|742113327|ref|XP_010872946.1| | PREDICTED: homeobox protein Hox-B4 [Esox lucius] | 0.0 |
| pfu_aug2.0_73.1_10225.t1 | gi|26984638|emb|CAD59115.1| | SI:dZ254O17.5 (homeo box protein B4a) [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_73.1_10225.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_73.1_10225.t1 atgaccatgagctcttttatattgaactcagcgcagtatgctgaaccgaaatttccaccagcggatgattatccacaact gaattatattcctaatcacaccgcggactattatagaccaaatcagttcccctcacattatggtttccccgacccacgga gatttgaggaggataaattcacacaagccagttatggacactgtaatccggaatccgtatcgcctacacaaccctctccc ccagtgtcgacgaacgggggagggggaggagggacgttaagtgggtacagccaggcatcaagttcccccagtcccccgtc ctcacccgcggaaagtgactccccgggatcacaaacctcgtgtgctcagcagtcagacggacagcctgttatatacccat ggatgaaaaaaagtcaaggaaataattcaggaaatagttgtgtctctgaatcaaagaggaacaggacggcatacacacga catcaaattctggaactggagaaggaatttcatttcaacagatatctcacacgcaggcgaagaatcgaaattgcacatac tttgtgcttatccgaaagacaaatcaaaatctggtttcaaaataggagaatgaagtggaagaaagagcacaaactgccaa acaccaaaacgaggctaatggatgccggaaatggacttatggacatgactgcgcatcattttgcgcacagcatgctggga cattcggaattaacgccaatctag |
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Protein
| Protein ID | pfu_aug2.0_73.1_10225.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_73.1_10225.t1 MTMSSFILNSAQYAEPKFPPADDYPQLNYIPNHTADYYRPNQFPSHYGFPDPRRFEEDKFTQASYGHCNPESVSPTQPSP PVSTNGGGGGGTLSGYSQASSSPSPPSSPAESDSPGSQTSCAQQSDGQPVIYPWMKKSQGNNSGNSCVSESKRNRTAYTR HQILELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKEHKLPNTKTRLMDAGNGLMDMTAHHFAHSMLG HSELTPI |
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