Gene
| Gene Model ID | pfu_aug2.0_735.1_17779 |
|---|---|
| Locus | scaffold735.1 : 32326 ... 66390 : + |
| To GenomeBrowser | scaffold735.1:32326..66390 |
| Genes list of scaffold | scaffold735.1 |
| Synonym | pfu_aug1.0_5620.1_38182 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sjoegren syndrome scleroderma autoantigen 1 | GO:0042802 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_735.1_17779.t1 | 1 | 1 | Auto_anti-p27 | 63 | 104 | 1.4e-14 | 53.5 | 2.9e-18 | 2.1e-14 | 52.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_735.1_17779.t1 | gi|507693914|ref|XP_004713587.1| | PREDICTED: Sjoegren syndrome/scleroderma autoantigen 1 [Echinops telfairi] | 1.0e-29 |
| pfu_aug2.0_735.1_17779.t1 | gi|348564976|ref|XP_003468280.1| | PREDICTED: Sjoegren syndrome/scleroderma autoantigen 1 [Cavia porcellus] | 2.0e-29 |
| pfu_aug2.0_735.1_17779.t1 | gi|634859078|ref|XP_007942962.1| | PREDICTED: Sjoegren syndrome/scleroderma autoantigen 1 [Orycteropus afer afer] | 2.0e-29 |
| pfu_aug2.0_735.1_17779.t1 | gi|676465802|ref|XP_009057361.1| | hypothetical protein LOTGIDRAFT_217206 [Lottia gigantea] | 3.0e-29 |
| pfu_aug2.0_735.1_17779.t1 | gi|488586642|ref|XP_004478656.1| | PREDICTED: Sjoegren syndrome/scleroderma autoantigen 1 isoform X2 [Dasypus novemcinctus] | 3.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_735.1_17779.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_735.1_17779.t1 atgtggattatgcccccgcataccccggatccgccaccagaaaataaagagatgccagtcagagacagcagtgcgttgaa cagtaagggacggaaaaggcctatcagtgaaactctagatgattttgactgggaaccgaatgaggcggagagaaaattac tgcaggctcgcagagacagatcagataaaattagtaagataatgggagactacctgctgaaaggatacaaaatgttagct acatcatgtgatgaatgctcgactatattactagaggacaaatcaggcatgaagtattgtatagcttgtaaagaactgga tacagacacggagaaagacaaccctgagatgatacctctgggtaaccgggaatgtggaaggattgtacgcactaaaccgg atgacgataccatttacaattaa |
|
Protein
| Protein ID | pfu_aug2.0_735.1_17779.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_735.1_17779.t1 MWIMPPHTPDPPPENKEMPVRDSSALNSKGRKRPISETLDDFDWEPNEAERKLLQARRDRSDKISKIMGDYLLKGYKMLA TSCDECSTILLEDKSGMKYCIACKELDTDTEKDNPEMIPLGNRECGRIVRTKPDDDTIYN |
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