Gene
| Gene Model ID | pfu_aug2.0_735.1_17784 |
|---|---|
| Locus | scaffold735.1 : 135877 ... 160735 : - |
| To GenomeBrowser | scaffold735.1:135877..160735 |
| Genes list of scaffold | scaffold735.1 |
| Synonym | pfu_aug1.0_7068.1_67613 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_735.1_17784.t1 | 4 | 1 | DUF2723 | 79 | 146 | 3.7e-19 | 68.8 | 2.5e-23 | 3.7e-19 | 68.8 |
| pfu_aug2.0_735.1_17784.t1 | 4 | 2 | DUF2723 | 166 | 202 | 3.7e-19 | 68.8 | 1.7e-05 | 0.26 | 10.7 |
| pfu_aug2.0_735.1_17784.t1 | 4 | 3 | DUF2723 | 221 | 231 | 3.7e-19 | 68.8 | 0.5 | 7500.0 | -3.8 |
| pfu_aug2.0_735.1_17784.t1 | 4 | 4 | DUF2723 | 321 | 346 | 3.7e-19 | 68.8 | 0.15 | 2200.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_735.1_17784.t1 | gi|511828313|ref|XP_004738891.1| | PREDICTED: transmembrane protein 260 isoform X1 [Mustela putorius furo] | 0.0 |
| pfu_aug2.0_735.1_17784.t1 | gi|532073967|ref|XP_005322789.1| | PREDICTED: transmembrane protein 260 [Ictidomys tridecemlineatus] | 0.0 |
| pfu_aug2.0_735.1_17784.t1 | gi|512814536|ref|XP_004877815.1| | 0.0 | |
| pfu_aug2.0_735.1_17784.t1 | gi|512862068|ref|XP_002933788.2| | PREDICTED: transmembrane protein 260 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_735.1_17784.t1 | gi|395843347|ref|XP_003794449.1| | PREDICTED: transmembrane protein 260 [Otolemur garnettii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_735.1_17784.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_735.1_17784.t1 atgcctccatctagcaacaagaagaacagatcaaatctcaaagtcagaaacaagaaaaatggacccgaaattcgccacac ccctgcaaaaatatgcaaccctgaggagaaactttattcaagctattcgaggatggtatcaacaacagagcagcatttca tttttgcatcaggtcttggtataacaacatttgccatctatgtagctacagcatatccatctgtaccaggaggggattca ggtgaattgatagtagcagctcatgagctgggggtagcccatcccccaggctatcctttgtttaccttgttgtcatgggt tacgatgaagctcctcccccttggcagtctggcatggagggtgaacgtcctgaatgcagcattctccgcaatggcagtat ctctgatggtgttactagtcacgagcaaagaaaataccacagctttccattcagaaaacgattcctttcagttgtctttt agatttgtagctaaaaagctgtctatattaggatcctttctgtgtggtttatccctatgtaatcaacacacccttgtgat ctacgtggcctgtatagccttgtttgtattagtcaatcaacatcagtcacaggtaggtcaacatcagtcacagggactgc cttttacctaccttctatacatgtcatcagcattcctcgctggtctgtcattatacctctacctacctatctcatctcac ctcggtcacgccagatggacatggggtgaccagcggtcagtgtcaggatttatcactcacctactcaggcaggagtatgg aacttttgatctggtcagtaagggaaaggaccatgttggtcagggattattccatggcttaagggtaaaaaacgattcgt acaacattcttatttggtcaatgatggctgtctatatgattttcttttcttggagagcaaacctggacattaaaaatcct ctgcttctgggagttgtggagagattttggatgcaatctgacattatcattgttataatagcagctcaggctttcacttg gctattaaggtatttgtacttgtgtgaaaatgttcgtccagacatttccctgtttgatcaagaggtcctaacctatgatt ggtcagttcccatgatgaggaaggtgtggcctaatattacatttcctggggacctactccacctgaaaacccaaatacgt gaagatggaagacaatcgtttgacttcaagacattccttgatgcaaattatcatagggcaccaatatttggctgtatagg tgtacaggatcatgagaattcgtggaaggaatcgtaccagctgtggccatacggagtttgctcaaaatttgttagaaagg gagataatctagatatagatgagtatgctaagttgacgtctgatatggcagcacattggaaacataaaaggcaagtagaa gagtttgaggatacttcctgggaaaatgtagcatctaatgagatgtggcatgcaaagatcagcagtgccttctttttgta tgaaatggcagaaaaatctgctaaaaaggaagaaaaggctaaatatctactccactcatacaatctatacagtaaagcta tggagagaaattcggatttcccgacacactggtacaagaacttcgccctggtatgtgaacggttactccactttcaactt tggcccatagatatgagagaaaaatactctttcatgttcttctatgaaagatacatcgttttcacccttggggtctcaat atttttcaaaaaccttggcgagcctggggttttacatgtttttgagacctctcgggtggaactgatgtatctttcatag |
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Protein
| Protein ID | pfu_aug2.0_735.1_17784.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_735.1_17784.t1 MPPSSNKKNRSNLKVRNKKNGPEIRHTPAKICNPEEKLYSSYSRMVSTTEQHFIFASGLGITTFAIYVATAYPSVPGGDS GELIVAAHELGVAHPPGYPLFTLLSWVTMKLLPLGSLAWRVNVLNAAFSAMAVSLMVLLVTSKENTTAFHSENDSFQLSF RFVAKKLSILGSFLCGLSLCNQHTLVIYVACIALFVLVNQHQSQVGQHQSQGLPFTYLLYMSSAFLAGLSLYLYLPISSH LGHARWTWGDQRSVSGFITHLLRQEYGTFDLVSKGKDHVGQGLFHGLRVKNDSYNILIWSMMAVYMIFFSWRANLDIKNP LLLGVVERFWMQSDIIIVIIAAQAFTWLLRYLYLCENVRPDISLFDQEVLTYDWSVPMMRKVWPNITFPGDLLHLKTQIR EDGRQSFDFKTFLDANYHRAPIFGCIGVQDHENSWKESYQLWPYGVCSKFVRKGDNLDIDEYAKLTSDMAAHWKHKRQVE EFEDTSWENVASNEMWHAKISSAFFLYEMAEKSAKKEEKAKYLLHSYNLYSKAMERNSDFPTHWYKNFALVCERLLHFQL WPIDMREKYSFMFFYERYIVFTLGVSIFFKNLGEPGVLHVFETSRVELMYLS |
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