Gene
| Gene Model ID | pfu_aug2.0_735.1_17788 |
|---|---|
| Locus | scaffold735.1 : 198552 ... 201645 : - |
| To GenomeBrowser | scaffold735.1:198552..201645 |
| Genes list of scaffold | scaffold735.1 |
| Synonym | pfu_aug1.0_4434.1_23570 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_735.1_17788.t1 | 1 | 1 | Arf | 9 | 178 | 4.1e-07 | 29.4 | 6.1e-10 | 5.6e-07 | 28.9 |
| pfu_aug2.0_735.1_17788.t1 | 1 | 1 | Ras | 14 | 181 | 1.5e-34 | 118.7 | 1.8e-37 | 1.7e-34 | 118.5 |
| pfu_aug2.0_735.1_17788.t1 | 1 | 1 | Miro | 14 | 127 | 4.8e-15 | 56.0 | 6.9e-18 | 6.4e-15 | 55.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_735.1_17788.t1 | gi|676433775|ref|XP_009047010.1| | hypothetical protein LOTGIDRAFT_199832 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_735.1_17788.t1 | gi|675855874|ref|XP_009013497.1| | hypothetical protein HELRODRAFT_156600 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_735.1_17788.t1 | gi|410920647|ref|XP_003973795.1| | PREDICTED: cell division control protein 42 homolog isoform X1 [Takifugu rubripes] | 2.8026e-45 |
| pfu_aug2.0_735.1_17788.t1 | gi|734635060|ref|XP_010746098.1| | PREDICTED: cell division control protein 42 homolog [Larimichthys crocea] | 2.8026e-45 |
Transcript
| Transcript ID | pfu_aug2.0_735.1_17788.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_735.1_17788.t1 atggctgcccgatatgagccactggagaattcatctctgaaatgtgtggttataggagatacgggaagtggaaaaagcgc gctggctcatagaatagccgcgcaggagttcaagtccgaatctgacccgacgctcttcgacaattttgctgctacaatca cagtagatggaattccataccatttaagcatttttgacacaacaggcaagcatgacatggctcgtcttcgtgctctatct tacgtcaaaagtgacgtagtcatcgtctgcttttctgtgataaatttagaaacttttaacaacgtcaaaaagttttgggt agcggaattacgtcatcacttaccaagagcgccatttctattggttggaactcatacagacgtacggtataatacaccag atatccagctaaccaccgattctttcgtttcgcctggccgaggatcagactctgctttggaaataggtgctttcacttac cttgagtgttcatcgttgaccggcgatggcattgatgaactatgcaaagaaatagtagtcgccgtctcggtcaaaccaac ggaaatatccaaaaaatctacttcctgttgtgcagtctcgtga |
|
Protein
| Protein ID | pfu_aug2.0_735.1_17788.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_735.1_17788.t1 MAARYEPLENSSLKCVVIGDTGSGKSALAHRIAAQEFKSESDPTLFDNFAATITVDGIPYHLSIFDTTGKHDMARLRALS YVKSDVVIVCFSVINLETFNNVKKFWVAELRHHLPRAPFLLVGTHTDVRYNTPDIQLTTDSFVSPGRGSDSALEIGAFTY LECSSLTGDGIDELCKEIVVAVSVKPTEISKKSTSCCAVS |
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