Gene
| Gene Model ID | pfu_aug2.0_7350.1_02905 |
|---|---|
| Locus | scaffold7350.1 : 441 ... 14248 : + |
| To GenomeBrowser | scaffold7350.1:441..14248 |
| Genes list of scaffold | scaffold7350.1 |
| Synonym | pfu_aug1.0_4846.1_01830 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| merlin isoform x3 | GO:0008092 GO:0044424 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7350.1_02905.t1 | 1 | 1 | FERM_C | 39 | 84 | 2.5e-10 | 40.4 | 2.6e-13 | 5.5e-10 | 39.3 |
| pfu_aug2.0_7350.1_02905.t1 | 1 | 1 | ERM | 132 | 314 | 4.8e-22 | 78.7 | 2.2e-25 | 4.8e-22 | 78.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7350.1_02905.t1 | gi|676447435|ref|XP_009051406.1| | hypothetical protein LOTGIDRAFT_103995 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_7350.1_02905.t1 | gi|524888100|ref|XP_005100626.1| | PREDICTED: merlin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_7350.1_02905.t1 | gi|284005154|ref|NP_001164711.1| | neurofibromin 2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_7350.1_02905.t1 | gi|755925281|ref|XP_011298576.1| | PREDICTED: merlin isoform X2 [Fopius arisanus] | 0.0 |
| pfu_aug2.0_7350.1_02905.t1 | gi|665800717|ref|XP_008548335.1| | PREDICTED: merlin [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_7350.1_02905.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7350.1_02905.t1 atgcctttcgttaacatgaaaaaggcatcttctcagtcgggtgcaagttcgaagagtttctctgtcagggtaacaactat ggatgcagaattggaattctctaacattgatgtttagtttgtgataaagccagtggataaaaaagccagtgactttgtat tcttcgcaccaaaagtcaaaattaacaaactgatattagaactttgtgtaggaaatcatgagttatttatgaggcggagg agacctgactcaatggaaatacaacagatgaagacgaatgcaagtgaggaaaaacttagaaaacgggtaagtttaaatgt tttaatagacgttaacacaagactgcgaaaacggctggaccgtgccaaacttgccaaggagaagcagcttaaggaacagg ccttaagggagaaggcagacctggagagaaaactcatgaggatgcaggatgaagtcagaaatgctcaggaacaacttcga cgttcagaggagacgactgagttattagcggaaaaagctcgagtagcggaggaggaggctcaactcctgactcagaaagc tgcggaaacggaatcggaaatacagcgtataaaaatcactgccattaagactgaagaggagagaatgttgatggagtaca gagcgagggaggctgagatgatagccactaaactgttagaggactcagagagaagggcaaaggaagcagaacagttgaga gaagaattaactcaggccaaaatgtcagagaaaatggccaaggacactttacttgaggtcaccagggccgcatcaccaaa ttttcagagtactgtgtatcccttatcatcccttacgtctgacctgtccaccttccacctggatccacctcccagtacag aggacggtgagatcagctgtgagctgttaacagaaggggacatggcacaattatctcacgagatagagaaagaaag |
|
Protein
| Protein ID | pfu_aug2.0_7350.1_02905.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7350.1_02905.t1 MPFVNMKKASSQSGASSKSFSVRVTTMDAELEFSNIDVXFVIKPVDKKASDFVFFAPKVKINKLILELCVGNHELFMRRR RPDSMEIQQMKTNASEEKLRKRVSLNVLIDVNTRLRKRLDRAKLAKEKQLKEQALREKADLERKLMRMQDEVRNAQEQLR RSEETTELLAEKARVAEEEAQLLTQKAAETESEIQRIKITAIKTEEERMLMEYRAREAEMIATKLLEDSERRAKEAEQLR EELTQAKMSEKMAKDTLLEVTRAASPNFQSTVYPLSSLTSDLSTFHLDPPPSTEDGEISCELLTEGDMAQLSHEIEKE |
|