Gene
| Gene Model ID | pfu_aug2.0_7377.1_26220 |
|---|---|
| Locus | scaffold7377.1 : 1 ... 2705 : - |
| To GenomeBrowser | scaffold7377.1:1..2705 |
| Genes list of scaffold | scaffold7377.1 |
| Synonym | pfu_aug1.0_83.1_50612 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| PREDICTED: caltractin-like [Aplysia californica] | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7377.1_26220.t1 | 2 | 1 | EF-hand_8 | 2 | 39 | 1.1e-09 | 37.7 | 0.055 | 68.0 | 3.1 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 1 | EF-hand_1 | 13 | 37 | 6.3e-15 | 53.2 | 0.0055 | 6.8 | 6.2 |
| pfu_aug2.0_7377.1_26220.t1 | 2 | 1 | EF-hand_7 | 13 | 35 | 6.7e-13 | 48.5 | 0.073 | 90.0 | 3.3 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 1 | EF-hand_6 | 24 | 36 | 4.8e-11 | 41.5 | 1.6 | 2000.0 | -0.9 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 1 | EF-hand_5 | 28 | 36 | 4.4e-09 | 35.2 | 2.3 | 2800.0 | -2.1 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 2 | EF-hand_1 | 50 | 76 | 6.3e-15 | 53.2 | 6.2e-07 | 0.00077 | 18.5 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 2 | EF-hand_6 | 50 | 76 | 4.8e-11 | 41.5 | 5.0e-08 | 6.2e-05 | 22.5 |
| pfu_aug2.0_7377.1_26220.t1 | 2 | 2 | EF-hand_7 | 51 | 111 | 6.7e-13 | 48.5 | 6.9e-15 | 8.5e-12 | 45.0 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 2 | EF-hand_5 | 55 | 73 | 4.4e-09 | 35.2 | 2.7e-05 | 0.034 | 13.4 |
| pfu_aug2.0_7377.1_26220.t1 | 2 | 2 | EF-hand_8 | 63 | 112 | 1.1e-09 | 37.7 | 3.3e-12 | 4.1e-09 | 35.9 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 3 | EF-hand_1 | 86 | 111 | 6.3e-15 | 53.2 | 3.4e-11 | 4.2e-08 | 31.9 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 3 | EF-hand_5 | 88 | 110 | 4.4e-09 | 35.2 | 1.6e-08 | 2.0e-05 | 23.7 |
| pfu_aug2.0_7377.1_26220.t1 | 3 | 3 | EF-hand_6 | 92 | 112 | 4.8e-11 | 41.5 | 3.2e-06 | 0.0039 | 16.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7377.1_26220.t1 | gi|524916991|ref|XP_005113262.1| | PREDICTED: caltractin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_7377.1_26220.t1 | gi|676489384|ref|XP_009064917.1| | hypothetical protein LOTGIDRAFT_196719 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_7377.1_26220.t1 | gi|260809688|ref|XP_002599637.1| | hypothetical protein BRAFLDRAFT_242608 [Branchiostoma floridae] | 8.40779e-45 |
| pfu_aug2.0_7377.1_26220.t1 | gi|260841586|ref|XP_002613993.1| | hypothetical protein BRAFLDRAFT_118451 [Branchiostoma floridae] | 1.96182e-44 |
| pfu_aug2.0_7377.1_26220.t1 | gi|291234506|ref|XP_002737188.1| | PREDICTED: caltractin-like [Saccoglossus kowalevskii] | 5.00264e-43 |
Transcript
| Transcript ID | pfu_aug2.0_7377.1_26220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7377.1_26220.t1 atgcgtgctcttgggtttaaatgcagcagggatgatgcgaaacaaatgattgctgatgtaaacttaaaggggaagagcca tatagaattcacagaatttctggaagtagtgatagacagacaaggggatgccagggatatgtatgatgagatattaaagg gatttactatgtttgattatgataaatcaggttcaattactatagacaatttaaagaaggcatgtgaagaggcagggata aaattcactcagcgagagctggaagaaatgatcgaggaagcagatatcaatggtgacgggaaaatagaccaatcagaatt catcagaatcatgttacagacgaatttgttttga |
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Protein
| Protein ID | pfu_aug2.0_7377.1_26220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7377.1_26220.t1 MRALGFKCSRDDAKQMIADVNLKGKSHIEFTEFLEVVIDRQGDARDMYDEILKGFTMFDYDKSGSITIDNLKKACEEAGI KFTQRELEEMIEEADINGDGKIDQSEFIRIMLQTNLF |
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