Gene
| Gene Model ID | pfu_aug2.0_74.1_13529 |
|---|---|
| Locus | scaffold74.1 : 1 ... 9299 : + |
| To GenomeBrowser | scaffold74.1:1..9299 |
| Genes list of scaffold | scaffold74.1 |
| Synonym | pfu_aug1.0_4200.1_59463 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_74.1_13529.t1 | 5 | 1 | WD40 | 196 | 231 | 9.9e-18 | 63.2 | 2.8e-12 | 4.1e-08 | 32.7 |
| pfu_aug2.0_74.1_13529.t1 | 5 | 2 | WD40 | 243 | 278 | 9.9e-18 | 63.2 | 5.0e-05 | 0.74 | 9.8 |
| pfu_aug2.0_74.1_13529.t1 | 5 | 3 | WD40 | 357 | 373 | 9.9e-18 | 63.2 | 3.6e-06 | 0.053 | 13.4 |
| pfu_aug2.0_74.1_13529.t1 | 5 | 4 | WD40 | 380 | 405 | 9.9e-18 | 63.2 | 6.5e-05 | 0.96 | 9.4 |
| pfu_aug2.0_74.1_13529.t1 | 5 | 5 | WD40 | 436 | 458 | 9.9e-18 | 63.2 | 0.18 | 2700.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_74.1_13529.t1 | gi|676471703|ref|XP_009059257.1| | hypothetical protein LOTGIDRAFT_233981 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_74.1_13529.t1 | gi|524898612|ref|XP_005105752.1| | PREDICTED: WD repeat-containing protein 81-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_74.1_13529.t1 | gi|260787930|ref|XP_002589004.1| | hypothetical protein BRAFLDRAFT_87476 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_74.1_13529.t1 | gi|642932466|ref|XP_008197127.1| | PREDICTED: WD repeat-containing protein 81 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_74.1_13529.t1 | gi|642932464|ref|XP_008197125.1| | PREDICTED: WD repeat-containing protein 81 isoform X1 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_74.1_13529.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_74.1_13529.t1 cagtgtagaatccagctctcctctcagcccctcctcatggaacacacggaaaacctatagtctgaccaatataactgagg acagagatgagacatttgaggggagtggtcgctacagagagaacattaaagaagagttagaaaatgtcttcacaccagaa ttagcctatgcatcttacataccattttgcagaatatttggcagcatacatatagagcagcatctccctaatgaagattt aatacgacacctctgttctcagtatgatgttaggtttgacgtggattcctcagagagtggctcagaacctcagtcaccta gtgaagatatccagcagatagtgcagggtaataatagagagataacgggtaataggatacagctccctgtagattcctca ggaccggactttatcaagtttggacctatacacaggagctctaaaatactcaaactcgatccggatgaagtcaaatgtga catgaaggagaggtctagtcacctgaaaggaaactggctcctgtactgggaacatgaactaggtctgagtgagcgagaca cgctgtttaatttcaagcacatcaggttacactcgtttgagggtcactctaatagtgtccgatcactgaccgtactaaac aacgaaaactccttcatcagtgccagtaaagacaaaacagtcaagctgtggtctgttaaatgctttggtgatggaactgg caagagtaaatgtcagatgacctatcaccgccataagaaatctattttctctgtggtatatctggactcagtgaggctag tagccacttgtgatagctctgtacatatatgggacccgtttaccggtgagattgtacgtcagttagactcatctcggtat gctccagtcacggccatggtagccttaccagctccgagccctcagataatcacagcaactaatgaggcttcacttaagta ccttgacctaagaacagcaaattatgctcatgaattcaagaccagtgctgtatcagcagatttatgcaaaataattattg gtgttaaaattattctaaaatccttcaacaggaagagttttatctctacatcatttgacggcacagtaaaagtatggaac gttaatgatgtcaaggaatgcaccattctcaaaggtcacacagacccagtacattgttttgccatgtataaaggacaagt tataagtgctacaacgggaaacaaaatcggcatccattcttctactgagagtcaggctagttttacctccaccaagctgc cgtctactacatttcggggagttctgacaagtatggcggtactacctttaaataaaacactattgctaggagccgacaat ggtggcatcagacttctatgctag |
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Protein
| Protein ID | pfu_aug2.0_74.1_13529.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_74.1_13529.t1 SVESSSPLSPSSWNTRKTYSLTNITEDRDETFEGSGRYRENIKEELENVFTPELAYASYIPFCRIFGSIHIEQHLPNEDL IRHLCSQYDVRFDVDSSESGSEPQSPSEDIQQIVQGNNREITGNRIQLPVDSSGPDFIKFGPIHRSSKILKLDPDEVKCD MKERSSHLKGNWLLYWEHELGLSERDTLFNFKHIRLHSFEGHSNSVRSLTVLNNENSFISASKDKTVKLWSVKCFGDGTG KSKCQMTYHRHKKSIFSVVYLDSVRLVATCDSSVHIWDPFTGEIVRQLDSSRYAPVTAMVALPAPSPQIITATNEASLKY LDLRTANYAHEFKTSAVSADLCKIIIGVKIILKSFNRKSFISTSFDGTVKVWNVNDVKECTILKGHTDPVHCFAMYKGQV ISATTGNKIGIHSSTESQASFTSTKLPSTTFRGVLTSMAVLPLNKTLLLGADNGGIRLLC |
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