Gene
| Gene Model ID | pfu_aug2.0_74.1_13534 |
|---|---|
| Locus | scaffold74.1 : 62866 ... 70234 : + |
| To GenomeBrowser | scaffold74.1:62866..70234 |
| Genes list of scaffold | scaffold74.1 |
| Synonym | pfu_aug1.0_10622.1_46236 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_74.1_13534.t1 | 2 | 1 | 7TM_GPCR_Srsx | 55 | 172 | 1.8e-08 | 33.8 | 3.1e-10 | 9.2e-07 | 28.2 |
| pfu_aug2.0_74.1_13534.t1 | 3 | 1 | 7TM_GPCR_Srx | 55 | 179 | 1.5e-06 | 27.5 | 1.1e-06 | 0.0033 | 16.5 |
| pfu_aug2.0_74.1_13534.t1 | 2 | 1 | 7tm_1 | 60 | 178 | 1.2e-25 | 90.1 | 1.3e-16 | 3.7e-13 | 49.2 |
| pfu_aug2.0_74.1_13534.t1 | 2 | 1 | Srg | 62 | 173 | 4.1e-06 | 26.4 | 3.9e-05 | 0.12 | 11.8 |
| pfu_aug2.0_74.1_13534.t1 | 2 | 2 | 7TM_GPCR_Srsx | 166 | 232 | 1.8e-08 | 33.8 | 0.00014 | 0.4 | 9.7 |
| pfu_aug2.0_74.1_13534.t1 | 2 | 2 | Srg | 171 | 299 | 4.1e-06 | 26.4 | 6.3e-08 | 0.00019 | 20.9 |
| pfu_aug2.0_74.1_13534.t1 | 2 | 2 | 7tm_1 | 173 | 337 | 1.2e-25 | 90.1 | 5.4e-16 | 1.6e-12 | 47.1 |
| pfu_aug2.0_74.1_13534.t1 | 3 | 2 | 7TM_GPCR_Srx | 173 | 298 | 1.5e-06 | 27.5 | 5.8e-07 | 0.0017 | 17.5 |
| pfu_aug2.0_74.1_13534.t1 | 3 | 3 | 7TM_GPCR_Srx | 307 | 343 | 1.5e-06 | 27.5 | 0.28 | 830.0 | -1.2 |
Transcript
| Transcript ID | pfu_aug2.0_74.1_13534.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_74.1_13534.t1 atgaattccacagaatcgtcactgttgaactccacagtggcctgtttggagaactgcacaaccaccatcaatactataga cgacaaaaccacagccatagctaatgacatagtgatcgtggttcttaactatgtcaactacgtcctacttccagttttcc tcgtgcttggactgaccggaaacacgctgaccatcatggtaatgaacaacaagaagtttgtcaatcagacgtcaaccctt ttcctgacagcgctctccttgtctgataccgtcttgctactcacccaaccctttaacaaggtcttcgtcatgaagctgtt cgggttagatctacgagcattgtcaaacatcggctgcaagattttcttcatcattttcaaaacatccaaaatgacgtcat cttggtttttggttcttctatgctttgagcgcttcgtagctgtatggtttccattgaaggccaagaccatatgcaccagg cggtatgctttcattgcgatagcggcagtctaccttgtcattgttctactatgctttgagcgcttcgtagctgtatggtt tccattgaaggccaagaccatatgcaccaggcgatatgctttcattgccataacggtagtctaccttgtcattggtagct acactacaatatggagctatgcgtcaaacatcgacgagaagggaatctgccatccagaccagtacgataagtccgaccct gttgaggttcagaagtttgggaggttcatcataggaggagtatcactttattccttgattccaaccaccatcctcctcac cctgacacctcttattgtggtgcagctgttcagacgagcgaaaatgtttgggaaaatgtcttcccagtctaaaaagaagc agtcggacacgaacaaaaccaccgtcatgttggttggggtaatgtttgcctacgtaatcctgatactacctgttaccggc cttcacctttttgccttcgtctttcgtctgaatgcctttggatcaggaagtcttggctgggccatctacagggagctgaa aaccggaagtgttacgacttatatgcagtgtacctgcactgttacatcgtacctgctaaatgaacattttcttgtaaaac tttacaaatag |
|
Protein
| Protein ID | pfu_aug2.0_74.1_13534.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_74.1_13534.t1 MNSTESSLLNSTVACLENCTTTINTIDDKTTAIANDIVIVVLNYVNYVLLPVFLVLGLTGNTLTIMVMNNKKFVNQTSTL FLTALSLSDTVLLLTQPFNKVFVMKLFGLDLRALSNIGCKIFFIIFKTSKMTSSWFLVLLCFERFVAVWFPLKAKTICTR RYAFIAIAAVYLVIVLLCFERFVAVWFPLKAKTICTRRYAFIAITVVYLVIGSYTTIWSYASNIDEKGICHPDQYDKSDP VEVQKFGRFIIGGVSLYSLIPTTILLTLTPLIVVQLFRRAKMFGKMSSQSKKKQSDTNKTTVMLVGVMFAYVILILPVTG LHLFAFVFRLNAFGSGSLGWAIYRELKTGSVTTYMQCTCTVTSYLLNEHFLVKLYK |
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