Gene
| Gene Model ID | pfu_aug2.0_74.1_13537 |
|---|---|
| Locus | scaffold74.1 : 191779 ... 219492 : + |
| To GenomeBrowser | scaffold74.1:191779..219492 |
| Genes list of scaffold | scaffold74.1 |
| Synonym | pfu_aug1.0_4600.1_52315 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_74.1_13537.t1 | 5 | 1 | Ig_2 | 227 | 255 | 1.0e-18 | 67.2 | 0.13 | 660.0 | 0.5 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 1 | I-set | 238 | 258 | 1.5e-20 | 72.8 | 0.026 | 130.0 | 2.5 |
| pfu_aug2.0_74.1_13537.t1 | 4 | 1 | C2-set_2 | 277 | 351 | 3.1e-09 | 36.6 | 0.0011 | 5.5 | 6.9 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 2 | I-set | 279 | 358 | 1.5e-20 | 72.8 | 0.00016 | 0.8 | 9.5 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 2 | Ig_2 | 280 | 365 | 1.0e-18 | 67.2 | 4.0e-08 | 0.0002 | 21.4 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 3 | Ig_2 | 374 | 462 | 1.0e-18 | 67.2 | 4.9e-10 | 2.4e-06 | 27.5 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 3 | I-set | 380 | 454 | 1.5e-20 | 72.8 | 1.2e-08 | 6.1e-05 | 22.7 |
| pfu_aug2.0_74.1_13537.t1 | 4 | 2 | C2-set_2 | 383 | 448 | 3.1e-09 | 36.6 | 3.9e-06 | 0.019 | 14.8 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 4 | I-set | 477 | 551 | 1.5e-20 | 72.8 | 2.2e-09 | 1.1e-05 | 25.2 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 4 | Ig_2 | 480 | 547 | 1.0e-18 | 67.2 | 3.2e-06 | 0.016 | 15.3 |
| pfu_aug2.0_74.1_13537.t1 | 4 | 3 | C2-set_2 | 483 | 544 | 3.1e-09 | 36.6 | 9.8e-07 | 0.0049 | 16.7 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 5 | I-set | 577 | 646 | 1.5e-20 | 72.8 | 2.5e-05 | 0.12 | 12.2 |
| pfu_aug2.0_74.1_13537.t1 | 5 | 5 | Ig_2 | 579 | 649 | 1.0e-18 | 67.2 | 7.5e-07 | 0.0037 | 17.3 |
| pfu_aug2.0_74.1_13537.t1 | 4 | 4 | C2-set_2 | 579 | 643 | 3.1e-09 | 36.6 | 3.4e-05 | 0.17 | 11.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_74.1_13537.t1 | gi|688534787|ref|XP_009293679.1| | PREDICTED: Schwann cell myelin protein-like [Danio rerio] | 1.0e-17 |
| pfu_aug2.0_74.1_13537.t1 | gi|688534801|ref|XP_009293714.1| | PREDICTED: B-cell receptor CD22 [Danio rerio] | 2.0e-17 |
| pfu_aug2.0_74.1_13537.t1 | gi|573900833|ref|XP_006638144.1| | PREDICTED: neural cell adhesion molecule 2-like [Lepisosteus oculatus] | 3.0e-17 |
| pfu_aug2.0_74.1_13537.t1 | gi|688534881|ref|XP_009293783.1| | PREDICTED: B-cell receptor CD22-like [Danio rerio] | 5.0e-17 |
| pfu_aug2.0_74.1_13537.t1 | gi|688534834|ref|XP_009293730.1| | PREDICTED: B-cell receptor CD22-like [Danio rerio] | 6.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_74.1_13537.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_74.1_13537.t1 atgtcagaagtgaagcatagagacgccgaatctccccgggcacctggtctcacttcggaataccgtttattccgaggttc ggaactgttccaaaggaaatatctcttagtaatttcgacatactatttctgtaactacaaagacaggcatatagcaataa tttacagttctaaattaattgacagtctttcactagatcaaaaacaaaggagggagtctccaacaacaccaggttgcagc acccacagtaaaaccccaaacacccaatgcaaaaacacagaacagacaagcacaaaaagagacacaaaagggacaaggaa caccatcgcaaaacacaaaaacatccaacacaaaggattacacataaaccaacgagaccaatgggcaaacggtgccgact taggacggccatctgccacggaaatagcagacgatgtggttatccaagattacntgttgtcaatctttgatccttcttat tttgttaattatgtcaccataaaatgaacaaactttccatctgtgtaccatatcatcaataatgtggcctgtacaacata ccaatgggatacgagtagattagaatctacaagtctgtcctcgaatcaaggaatagtgtgtgaaacaagtttatttttta gaagtttacaaaatgtacccttgtccgtagggccggcatacgtaggaagattaaactgtacaatagatcctatatctttg acattttgcttctttaacataacttcaactgactctggagtatacaaagtaacgaaaggagaaagtcaaagaaatggaaa tgtatttgtcatgaataaaccaacaacaccacagatttcaccaacaacagtagaagcagggcgccgagagacaatgacgt gtacatctacatcgacatctaccccgtcacctacaggacaagccatgctttatacatggacggtcaataatggaacgctg tctgatccacgatttacaacctctggtaacacattgaccataaacccggtgaggaaggaggacaaggatattctttttca gtgcaaagccagagaaagccaaggcctttcatcagatacaacagggattatcttaactatacattatcctccacaaggcg aaccggttatatcatccagcacactgacctatatcacaggcagtactgttacaatatcttgtagtgtaacaggggatggt aaccccaaggcaacgtggacatggagatgtggtaacagaatctttaatagcggttttacaaactccgtaggacgatccaa cctgacgtttctagtcaccaaggcagataacaaccagaactgtacatgtacagtttcatcttctgtaggatcatacaatc aaacttctgatcctgttacactagatatcagatactcaccacaaggaaagccagtaatgttatttagcacaatgacatac gtaacaggcagtactgttgcactttcctgtagtataacagaggatggtaatccccgggtcacatggacatggagatgtgg tagcagaacctttaacaacggtataatcacctcagttcgacagtctaatctgactatggtagttaccaagacggacaaca accagccttgtacatgtacagcttcatcttctgtagggtcctatagtcaaacatgttatcctgctatactggatataaga tactccccacaaggaaagcctgtgatgtcatacaacacgctcactcatttactgggcagtaatattgtcctttcatgtag tatattagatgatggtaacccccaggccacgtggacatggaagtgtggtaatcgtacttttaacagcggcataacaaact ctgtaggccgatcaaatttgaccttcgtagccaccatggccgaaaacaaccagccatgtacatgtacagcttcatcacct ctagggtcgtacagtcaaacatctgatcctgctgtcctggacatcagatcatcaagaaaaggaacaaacgagacgtatga tgcgatccaacgtccgtcccacgacaccaacacgtatgatgacttgtcaacgaaaacaaagaaagtgccaaggaaagaaa caaacgatatgtatgatgccgtacaaggttcctcaaatgacaacaacacctatgatgacttatcagcgaatacgaaacaa gattccaatgtctatatgaatactgcattcggaaactag |
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Protein
| Protein ID | pfu_aug2.0_74.1_13537.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_74.1_13537.t1 MSEVKHRDAESPRAPGLTSEYRLFRGSELFQRKYLLVISTYYFCNYKDRHIAIIYSSKLIDSLSLDQKQRRESPTTPGCS THSKTPNTQCKNTEQTSTKRDTKGTRNTIAKHKNIQHKGLHINQRDQWANGADLGRPSATEIADDVVIQDYXLSIFDPSY FVNYVTIKXTNFPSVYHIINNVACTTYQWDTSRLESTSLSSNQGIVCETSLFFRSLQNVPLSVGPAYVGRLNCTIDPISL TFCFFNITSTDSGVYKVTKGESQRNGNVFVMNKPTTPQISPTTVEAGRRETMTCTSTSTSTPSPTGQAMLYTWTVNNGTL SDPRFTTSGNTLTINPVRKEDKDILFQCKARESQGLSSDTTGIILTIHYPPQGEPVISSSTLTYITGSTVTISCSVTGDG NPKATWTWRCGNRIFNSGFTNSVGRSNLTFLVTKADNNQNCTCTVSSSVGSYNQTSDPVTLDIRYSPQGKPVMLFSTMTY VTGSTVALSCSITEDGNPRVTWTWRCGSRTFNNGIITSVRQSNLTMVVTKTDNNQPCTCTASSSVGSYSQTCYPAILDIR YSPQGKPVMSYNTLTHLLGSNIVLSCSILDDGNPQATWTWKCGNRTFNSGITNSVGRSNLTFVATMAENNQPCTCTASSP LGSYSQTSDPAVLDIRSSRKGTNETYDAIQRPSHDTNTYDDLSTKTKKVPRKETNDMYDAVQGSSNDNNTYDDLSANTKQ DSNVYMNTAFGN |
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