Gene
| Gene Model ID | pfu_aug2.0_74.1_13548 |
|---|---|
| Locus | scaffold74.1 : 327499 ... 343410 : + |
| To GenomeBrowser | scaffold74.1:327499..343410 |
| Genes list of scaffold | scaffold74.1 |
| Synonym | pfu_aug1.0_5170.1_67183 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_74.1_13548.t1 | 2 | 1 | PQ-loop | 236 | 255 | 3.1e-14 | 52.2 | 0.052 | 770.0 | -0.3 |
| pfu_aug2.0_74.1_13548.t1 | 2 | 2 | PQ-loop | 258 | 315 | 3.1e-14 | 52.2 | 2.4e-18 | 3.5e-14 | 52.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_74.1_13548.t1 | gi|665813778|ref|XP_008555461.1| | PREDICTED: PQ-loop repeat-containing protein 1 isoform X2 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_74.1_13548.t1 | gi|642923319|ref|XP_008193700.1| | PREDICTED: PQ-loop repeat-containing protein 1 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_74.1_13548.t1 | gi|699634589|ref|XP_009893249.1| | PREDICTED: PQ-loop repeat-containing protein 1 [Charadrius vociferus] | 0.0 |
| pfu_aug2.0_74.1_13548.t1 | gi|665813776|ref|XP_008555460.1| | PREDICTED: PQ-loop repeat-containing protein 1 isoform X1 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_74.1_13548.t1 | gi|527263369|ref|XP_005149914.1| | PREDICTED: PQ-loop repeat-containing protein 1 isoform X2 [Melopsittacus undulatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_74.1_13548.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_74.1_13548.t1 atggatggggcttgggcttttctgagcgtttacaagtctgtcagtgaatccagcgggcggtctactgttaatgtagagag tgagtcaagtcagtccagtacagtaattatagatcaaagtgctgttaacgagcagaatgagtcaagtcagtctgcatgta gtcctgttattatagagagtgagtcaagtcagtcttctctgaatgtgcagggagagtcaagtcagtctagtcctgttagt acagaaagtgaatcaagtcagtcttctctaaatgtgcggggtgagtcaagtcagtctagtcctgttattatggagagtga gtcgagtcagtcttctctgaatgtgcaggatgagtcaagtcagtcaagtactgttaatatacaggtagagagtgagtcaa gtcagtcttctgtaaatatacagagtgagtcaagtcagtcttttgattatgaatttcattgcagtgatgatactgattcc aatatgtctgaaaatgaaaatgaggtgttcgaaaggtttggtcgtcattttgagttacctctcttagctcagagtataat catggtctttactatgcttttactggtgcagctttgtgtacgtgttaagagtaaatcagaaatcctagcatctaagccgc acaagttcacagattttgatgtcaattatttttggaagtggtcggactttgccagttatgtacagttcctagtcgtcttc actacagtcctcagctttgtaacttggctatttttaaactattcgttttacgtagagacaatcggcttcttggcagtatt tgccgaggctatgcttggagcaccacaattttatagaaactttgtgaacaaatcaactcaaggaatgagttggaaaatgg tgtgcatgtggacatgcggagatgtgttcaagacaggatacttcattctgagagaagctccggcacagttctgggtttgc ggcatgctgcaagtatccatagacatcctcattctactacaagtgtttatttatagatataaaccggcaattagttaa |
|
Protein
| Protein ID | pfu_aug2.0_74.1_13548.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_74.1_13548.t1 MDGAWAFLSVYKSVSESSGRSTVNVESESSQSSTVIIDQSAVNEQNESSQSACSPVIIESESSQSSLNVQGESSQSSPVS TESESSQSSLNVRGESSQSSPVIMESESSQSSLNVQDESSQSSTVNIQVESESSQSSVNIQSESSQSFDYEFHCSDDTDS NMSENENEVFERFGRHFELPLLAQSIIMVFTMLLLVQLCVRVKSKSEILASKPHKFTDFDVNYFWKWSDFASYVQFLVVF TTVLSFVTWLFLNYSFYVETIGFLAVFAEAMLGAPQFYRNFVNKSTQGMSWKMVCMWTCGDVFKTGYFILREAPAQFWVC GMLQVSIDILILLQVFIYRYKPAIS |
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