Gene
| Gene Model ID | pfu_aug2.0_740.1_01090 |
|---|---|
| Locus | scaffold740.1 : 73353 ... 99336 : - |
| To GenomeBrowser | scaffold740.1:73353..99336 |
| Genes list of scaffold | scaffold740.1 |
| Synonym | pfu_aug1.0_5444.1_52540 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_740.1_01090.t1 | 2 | 1 | HD | 173 | 173 | 2.1e-06 | 27.7 | 0.48 | 1800.0 | -1.1 |
| pfu_aug2.0_740.1_01090.t1 | 2 | 2 | HD | 232 | 313 | 2.1e-06 | 27.7 | 1.1e-09 | 4.1e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_740.1_01090.t1 | gi|676433839|ref|XP_009047031.1| | hypothetical protein LOTGIDRAFT_172204 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_740.1_01090.t1 | gi|390334457|ref|XP_003723933.1| | PREDICTED: uncharacterized protein LOC100894127 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_740.1_01090.t1 | gi|296434281|ref|NP_001171807.1| | HD phosphohydrolase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_740.1_01090.t1 | gi|260836715|ref|XP_002613351.1| | hypothetical protein BRAFLDRAFT_118738 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_740.1_01090.t1 | gi|156374076|ref|XP_001629635.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_740.1_01090.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_740.1_01090.t1 atggacggtgattcattgtttgacaagattaaagaaacagaagagttgaatatggacctggtatgggacattattgactg gtataaacaggccgtcgtccgaacaagggaggtcactgaagtagaaatggaggcgatagcgctgagccgacttggacgag tatacgacaaagtgctgaagattaagtataaggccaaggaatatttgatgaggtccatgcagttagcacactccatgcac ccnggaagagttgaatatggacctgagtggttcaaagattgtgccgaaattctggagcgttatcagcaagaaacggtaca agcagaggaagagaaatggcgcaaagaaagggaaggaattctgaaagacatacagaaacaaattaacaacttgaagaaat atgacgatgagaaggaccacatagagttcctgaagtacgtatatcgggttttcccgccgaagaatacggagcacaaattg gagggagttccgagacagaaatactcttttatcgagcacgataaaacgaagaaacttctacagaaagccgttattcatta ccatccggacaaagtggacactgagaagcatggaaagagcactagaatcgacatggatgtggtgtctgaagttattagtc tgtacgagagacatggagacgatgattatttgggggagagtgtcagtaaaactcagcattctatacaatgtgcactgtta gctgaggaggagggatacggtgacgaggtgatacttggtgccttcctccatgacattggtcatcttattggtgctgacca gggcttggaccggatggttactgacggggttaatctgggagctaacaatcatgacgtcattggcggggaattcttacgtc agcgaggatttcccaaactggtgtgcgacttggtccagggtcatgttcaagccaagagatacctagtttggaaaaatcga agttacagagaaaatctaagtgcagcaagcaagatgaccttggaacaccaaggaggaccaatgactgacaatgaagcgga agtgttcgaaaactcggacatgttcgatttgatcataaaaatgagaacctgggacgaacgaggaaaagatgtcagcatca gggacgtctccttggacaaatacaaaacattgtgtagaaaagtattaaatatatcatga |
|
Protein
| Protein ID | pfu_aug2.0_740.1_01090.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_740.1_01090.t1 MDGDSLFDKIKETEELNMDLVWDIIDWYKQAVVRTREVTEVEMEAIALSRLGRVYDKVLKIKYKAKEYLMRSMQLAHSMH XGRVEYGPEWFKDCAEILERYQQETVQAEEEKWRKEREGILKDIQKQINNLKKYDDEKDHIEFLKYVYRVFPPKNTEHKL EGVPRQKYSFIEHDKTKKLLQKAVIHYHPDKVDTEKHGKSTRIDMDVVSEVISLYERHGDDDYLGESVSKTQHSIQCALL AEEEGYGDEVILGAFLHDIGHLIGADQGLDRMVTDGVNLGANNHDVIGGEFLRQRGFPKLVCDLVQGHVQAKRYLVWKNR SYRENLSAASKMTLEHQGGPMTDNEAEVFENSDMFDLIIKMRTWDERGKDVSIRDVSLDKYKTLCRKVLNIS |
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