Gene
| Gene Model ID | pfu_aug2.0_740.1_01095 |
|---|---|
| Locus | scaffold740.1 : 195907 ... 224391 : + |
| To GenomeBrowser | scaffold740.1:195907..224391 |
| Genes list of scaffold | scaffold740.1 |
| Synonym | pfu_aug1.0_5094.1_67160 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| centrosomal protein of 41 kda-like | GO:0005856 GO:0042384 GO:0042995 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_740.1_01095.t1 | 2 | 1 | Rhodanese | 46 | 92 | 1.1e-10 | 41.8 | 0.13 | 1900.0 | -0.9 |
| pfu_aug2.0_740.1_01095.t1 | 2 | 2 | Rhodanese | 249 | 334 | 1.1e-10 | 41.8 | 3.9e-14 | 5.7e-10 | 39.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_740.1_01095.t1 | gi|524875375|ref|XP_005094416.1| | PREDICTED: centrosomal protein of 41 kDa-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_740.1_01095.t1 | gi|585704645|ref|XP_006823488.1| | PREDICTED: centrosomal protein of 41 kDa-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_740.1_01095.t1 | gi|676489346|ref|XP_009064905.1| | hypothetical protein LOTGIDRAFT_73843, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_740.1_01095.t1 | gi|597744399|ref|XP_007234253.1| | PREDICTED: centrosomal protein of 41 kDa-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_740.1_01095.t1 | gi|390351365|ref|XP_003727646.1| | PREDICTED: centrosomal protein of 41 kDa isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_740.1_01095.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_740.1_01095.t1 atggacaggaaccttaggaccagagttagtcaagaggtcaatgcaatgaaggatacagtaacgtcagaaataaaacaatc agtcactgatatggtcctaacagaatttaaggcagaaattcgtgaaaacgatgaaaggaaaaaccatgtttctaatttag tgttgtttaatctgccagagtcggatagtgaagatactgaaacccgtaaacagtttgacaacgataacatacagagcttg atgagtagtcttgatatcatcgattatgaaacgagagctatttttagactgggttcaagcgtcaccaaatacctagagag gattgaagacataagaaaaattttgtcaccaagaaaacttcctcccttgagaccgaaattattcaaagaggatagacttc aattatatcaaatattgagagatgctgaaaaagattacaagttcaagaaagatgaaattttcaaacgaatgaaggtcacg acgtttgtgcaattgttaatccaagtagatgcctttgaaagaggaggaagttcaatgtcacatatggataatggcaatat ggatccaccagatactccagatttagaggtacagaaaatccagtcaggaagccctgttccctcacacagagacgattacg gagataatactaacaggtcaaggtcaactatgttaggagttgtaaggggtgttggtgaggtagatgcatcaaaaccccaa gccccaccggctcctgtggctatagagggatcaccatacttaatactagacatccgagactctgatgcttatgatgaatg tcatattatctcagccaagaattaccctaaatcaatgttatcaagggcacaaaattatgaaacaaaggaaatgttgcagt ttaaaaatcagccaggtaaaataatacttgtatatgatgaagatgagaggtgggcacctgaggcagccacgactctcgta caacgtggatacgacaacttatttatgttatctggaggtatgagaatagcatataaagtatgtccagatggattgttcac gggtacaccaaatatgaatattacggaggctacgaaaccaccaacatgtatagttaaagctagtcagaaagatttctgta ctgaagatataaataaactcaccatgtacattgataatgcactggcagactcaagtgttggaagtcgtttatccaaagca agtactcatgctagcaggatgggaaaacatggtgactccagaaattcaaatgccagtagtgttagttccaaaccttggaa atag |
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Protein
| Protein ID | pfu_aug2.0_740.1_01095.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_740.1_01095.t1 MDRNLRTRVSQEVNAMKDTVTSEIKQSVTDMVLTEFKAEIRENDERKNHVSNLVLFNLPESDSEDTETRKQFDNDNIQSL MSSLDIIDYETRAIFRLGSSVTKYLERIEDIRKILSPRKLPPLRPKLFKEDRLQLYQILRDAEKDYKFKKDEIFKRMKVT TFVQLLIQVDAFERGGSSMSHMDNGNMDPPDTPDLEVQKIQSGSPVPSHRDDYGDNTNRSRSTMLGVVRGVGEVDASKPQ APPAPVAIEGSPYLILDIRDSDAYDECHIISAKNYPKSMLSRAQNYETKEMLQFKNQPGKIILVYDEDERWAPEAATTLV QRGYDNLFMLSGGMRIAYKVCPDGLFTGTPNMNITEATKPPTCIVKASQKDFCTEDINKLTMYIDNALADSSVGSRLSKA STHASRMGKHGDSRNSNASSVSSKPWK |
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