Gene
| Gene Model ID | pfu_aug2.0_744.1_14513 |
|---|---|
| Locus | scaffold744.1 : 2907 ... 32236 : + |
| To GenomeBrowser | scaffold744.1:2907..32236 |
| Genes list of scaffold | scaffold744.1 |
| Synonym | pfu_aug1.0_43965.1_70499 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein msx-2 isoform x2 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_744.1_14513.t1 | 1 | 1 | Homeobox | 156 | 197 | 2.8e-09 | 36.4 | 3.7e-13 | 5.5e-09 | 35.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_744.1_14513.t1 | gi|260804621|ref|XP_002597186.1| | muscle-specific homeobox-like protein [Branchiostoma floridae] | 1.0e-34 |
| pfu_aug2.0_744.1_14513.t1 | gi|524886526|ref|XP_005099856.1| | PREDICTED: homeobox protein MSX-2-like [Aplysia californica] | 3.0e-33 |
| pfu_aug2.0_744.1_14513.t1 | gi|390344123|ref|XP_003726050.1| | PREDICTED: retinal homeobox protein Rax [Strongylocentrotus purpuratus] | 2.0e-32 |
| pfu_aug2.0_744.1_14513.t1 | gi|291242574|ref|XP_002741182.1| | PREDICTED: segmentation polarity homeobox protein engrailed-like [Saccoglossus kowalevskii] | 4.0e-28 |
| pfu_aug2.0_744.1_14513.t1 | gi|242013428|ref|XP_002427409.1| | hypothetical protein Phum_PHUM317730 [Pediculus humanus corporis] | 4.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_744.1_14513.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_744.1_14513.t1 atgaacacgcttgcatcttttctggcttcaaattatgctttatatagtagtggacaaatccgaccaggcatgtactataa cccgtttccttatcatccacacaacacaacttacttgccgtcttcaagcatgccccaaataccacaactgacctcatccg gacagccagaatctacgaaatctcctgagacaccaaacgacagcaatgtttctacaaattgcacaaacgacaaagttaaa ttttcgatagacagtattcttgctcggaaaagcaagacagacgaaaacgtcactgaagaggtaaaagcagacgatatgtg gttaccggaagatgatggttcgatcaatccagatgaagaccaaactgacgcacagaaattttcatggttacaatgcaccc ggtacaaaccacctaaactaccacgattaaagaaaaaagatggagtaaagaagagaaaactcggaagaaacccgcgggta ccattcactcaacaccaagttgctgttcttgagcagaaattccgcagaactcactatttgagcagcatggatgtcgtgga attgtctacagcactcaacctcactgaaacaaggccaatgacatcgcagtgctacggtcacgtggtgtcttaccttgtcg ccgagaataattcgtcaactttgttgatggagaatttacaactttatgtcaaatcaagtgtcgaatcactttcaaacttg atgaacgatgtcaacctggactttcagcccaccaccagagatgtggatgtttag |
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Protein
| Protein ID | pfu_aug2.0_744.1_14513.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_744.1_14513.t1 MNTLASFLASNYALYSSGQIRPGMYYNPFPYHPHNTTYLPSSSMPQIPQLTSSGQPESTKSPETPNDSNVSTNCTNDKVK FSIDSILARKSKTDENVTEEVKADDMWLPEDDGSINPDEDQTDAQKFSWLQCTRYKPPKLPRLKKKDGVKKRKLGRNPRV PFTQHQVAVLEQKFRRTHYLSSMDVVELSTALNLTETRPMTSQCYGHVVSYLVAENNSSTLLMENLQLYVKSSVESLSNL MNDVNLDFQPTTRDVDV |
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