Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_744.1_14516
Locus scaffold744.1 : 106196 ... 111078 : +
To GenomeBrowser scaffold744.1:106196..111078
Genes list of scaffold scaffold744.1
Synonym pfu_aug1.0_123.1_50650

Manual annotation
Annotation by Blast2GO
Annotation GO
cre-tyr-3 protein GO:0004167 GO:0044237

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_744.1_14516.t1 2 1 Tyrosinase 69 69 7.8e-14 52.3 1.7 4900.0 -2.6
pfu_aug2.0_744.1_14516.t1 2 2 Tyrosinase 145 317 7.8e-14 52.3 2.6e-17 7.8e-14 52.3

Transcript
Transcript IDpfu_aug2.0_744.1_14516.t1
Definition-
>pfu_aug2.0_744.1_14516.t1
atgtatgtcatttgtagtattttcatatatccacaggtccaacaagttaacaacatacttgctactatagctatactagt
cggtgtatcaatggttcaaggttttccacaatcagtgcagaagaaggacgaatatctacgctgcttagaacagtacaata
aagactttgggaatacacatctatttagccatgaatttagatcactttgtaagatgcaagtgtcagaaaaacttacacaa
gtacatccacaggaacccatggactacttccattctctacatagagtagcatggtcagacatgaatgcagcaaggaaaaa
gcggtttacttccaggagaatacggaaagaaatccgttctctttccatggatgagaggagggctttattccgtgcaataa
acgatctaaagcaggatactagtgtatatccaaatgtatatgacgcttttgctaatcttcacaccggaaaaactttacga
tctgcctatcatggaccgaattttctcggatggaatagatactacttatatttatttgaaacagcacttcgaacgaaaga
tcctacagttgttttgccttattgggattctacccttgacttcaacatgaacgatccgtcccatacggtgatgttcagct
cggagttcatgggaaatgtggaccataccggtgcgctcgaatcaggaccttttatgaactggggcatcattcgggacatt
ggacagggagtcgtcgcagccgcttccgctcaaatagctgctgcagaggaagttcatttcaattctaaaatgaaagaacc
tagcacaaaaaataactttgagaaaaggaatagagattctagcccgaaaaataacttggagaaagttagtaaagaaccga
gcacgaaaagtaagttggagaaagtggataaggtaattcatccatctacatatgaatcaggtagaactgttgttgaagtt
acagaaccacaatctaccaaacagaaaatatcgttcagtgaactgaaaagtggaaacaacaatgaaggaaaaagtcaaac
ctacaaggaattaattgtcaacaatagtcgtaatataacggatacttcccctttgcctcagagcactacagtattaacta
caacacagccaatagtgacaaagaaggttccgtccaaaaagaccattaacactcatttcaaagaagtaaacaaagccaat
gctcactccccatcagaccagatatttttgtctgggggcattgtagctccatcttcggcaaaaattgctatgcaacaaaa
ttcaccgtcgagagtacctgtccgtggagctggcgttgatgtaaactctgtaaaagacagtttcgacattacctcaagtg
gtttatctcaacccaattttataggcagagggaatgtgattgtctaa

Protein
Protein IDpfu_aug2.0_744.1_14516.t1
Definition-
>pfu_aug2.0_744.1_14516.t1
MYVICSIFIYPQVQQVNNILATIAILVGVSMVQGFPQSVQKKDEYLRCLEQYNKDFGNTHLFSHEFRSLCKMQVSEKLTQ
VHPQEPMDYFHSLHRVAWSDMNAARKKRFTSRRIRKEIRSLSMDERRALFRAINDLKQDTSVYPNVYDAFANLHTGKTLR
SAYHGPNFLGWNRYYLYLFETALRTKDPTVVLPYWDSTLDFNMNDPSHTVMFSSEFMGNVDHTGALESGPFMNWGIIRDI
GQGVVAAASAQIAAAEEVHFNSKMKEPSTKNNFEKRNRDSSPKNNLEKVSKEPSTKSKLEKVDKVIHPSTYESGRTVVEV
TEPQSTKQKISFSELKSGNNNEGKSQTYKELIVNNSRNITDTSPLPQSTTVLTTTQPIVTKKVPSKKTINTHFKEVNKAN
AHSPSDQIFLSGGIVAPSSAKIAMQQNSPSRVPVRGAGVDVNSVKDSFDITSSGLSQPNFIGRGNVIV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495