Gene
| Gene Model ID | pfu_aug2.0_744.1_14519 |
|---|---|
| Locus | scaffold744.1 : 185348 ... 216676 : - |
| To GenomeBrowser | scaffold744.1:185348..216676 |
| Genes list of scaffold | scaffold744.1 |
| Synonym | pfu_aug1.0_22455.1_47521 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial translocator assembly and maintenance protein 41 homolog | GO:0004605 GO:0031314 GO:0032049 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_744.1_14519.t1 | 2 | 1 | Complex1_LYR | 10 | 56 | 1.5e-06 | 27.8 | 5.2e-10 | 1.5e-06 | 27.8 |
| pfu_aug2.0_744.1_14519.t1 | 2 | 1 | Mmp37 | 60 | 247 | 0.0 | 275.4 | 0.0 | 0.0 | 263.4 |
| pfu_aug2.0_744.1_14519.t1 | 2 | 2 | Complex1_LYR | 239 | 250 | 1.5e-06 | 27.8 | 3.1 | 9300.0 | -3.5 |
| pfu_aug2.0_744.1_14519.t1 | 2 | 2 | Mmp37 | 249 | 302 | 0.0 | 275.4 | 1.7e-05 | 0.052 | 12.5 |
| pfu_aug2.0_744.1_14519.t1 | 1 | 1 | PAN_1 | 555 | 631 | 3.6e-06 | 26.6 | 3.7e-09 | 1.1e-05 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_744.1_14519.t1 | gi|317575767|ref|NP_001187702.1| | mitochondrial mmp37-like protein [Ictalurus punctatus] | 0.0 |
| pfu_aug2.0_744.1_14519.t1 | gi|657779837|ref|XP_008317792.1| | PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_744.1_14519.t1 | gi|498975427|ref|XP_004548620.1| | PREDICTED: phosphatidate cytidylyltransferase, mitochondrial [Maylandia zebra] | 0.0 |
| pfu_aug2.0_744.1_14519.t1 | gi|512922602|ref|XP_004904771.1| | 0.0 | |
| pfu_aug2.0_744.1_14519.t1 | gi|551490888|ref|XP_005797016.1| | PREDICTED: mitochondrial translocator assembly and maintenance protein 41 homolog [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_744.1_14519.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_744.1_14519.t1 atgagtcgtcgcagtaagatacagattcaagtacttaaactgtataaagatttcctccgtgtgtccaaggataagcctgg agtcaaggattacatccgaagtgaattccgtaaaaacgcacagatagcaaggaaggataccctacatatagaacatttat tacgtagagacgtttgtgagagaatactcagtaattttccagatggtattgatatggcatttgcttatggatcagctgtg tttaagcaggaaggacaagatgaagcccagaaaaaatcaaatatgctggactttatattcgtagttaatgatccgttaga gtggcacagtcaaaatctcaaggcaaacaacagtcattactcatttttgaaatacctcggtccaaaagccattgcagaca ttcaaactaagtatggtgcaggagtttactttaattctaaggtatttgtagacggcagggaaatcaaatatggtgtatta agcacgtcggaacttgtttcagatttgtatgactggaaatcgttgtacatcagtggacggcttcataaacctgcaaaaat aatcattcggccagaaaagtccgatatcttgactgcaatgcaagtgaatttacaaaatgcgttacatgcatcattactaa tgctcccagaatatttcacggaggagcaactttaccttaaaatcacaagtctgtcatatgacggggactttagaatgaga ttcggggaaaacaagaacaagaatttactaaaacatcatcagaaaaacgtcaagaaatccttggacattgaagaggtcat aagggtcatggcctttgaccctaactgtgatgaacgagtagccgatgctatccgagacatcgtttttaaatccagtgcaa ctcaaagggaaaagaagcttctgtcttggccagcaatggggtgttcgttctctaaggcagttatagtgttctacatgtat ctgttagatttagaaaagactgttattattattaatcatacagtcagtaataaaggatccaaactttatccaccggactt tggttattcattacatcacaccaaatccaccccggtaacatctacatgcagaaagagaaaaacaagatttagaggtttag atttttatggacgcatgcctagattaaggaaagcggtaccattgaagccaatgaatatgaaagtttacttcatcttcttg ctgctgtctctgcgttccatgtccaatgtcagtcaagcggcattcttcggagaccccagttgtttccttgttggatttct gtttggaatcattacacaggacatagacattattgaggacatattcgaggaggaagaggaagcttctgacaccacaacga atccatgcattccggatccttgtaatgataacggtcgatgtgtcgtcaacggagtgggcgaaggcgtcacagcagagtgc atatgtaacccgggatattgcggagattcgtgtacaccatcgaccgtgaccacgggttctaactgtgatgctaacgacct ctgtaggatccccggttctatctgtgtcaatgacgtatgtgtttgtgactgtggcgacatctatgtggatgacctcaaac cgaacactgcgacagatacacgtgatgcttgtgtcagagactgccctaatggttactccaatgttttcactcgttatgat ggaaacctcattaccgatgacaatggagttcagttaaatggtatagctactcgtgctgcttgtgagacagaatgcctgaa ttatgtaccgttcttctgtcgttcttatgagtataacgatggagcgaacagatgtaccctaaaccgggcacggaaggacg accctgtacgcttcagtacgtcaacagcgcaagatttcggtgagcgggattgtctctga |
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Protein
| Protein ID | pfu_aug2.0_744.1_14519.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_744.1_14519.t1 MSRRSKIQIQVLKLYKDFLRVSKDKPGVKDYIRSEFRKNAQIARKDTLHIEHLLRRDVCERILSNFPDGIDMAFAYGSAV FKQEGQDEAQKKSNMLDFIFVVNDPLEWHSQNLKANNSHYSFLKYLGPKAIADIQTKYGAGVYFNSKVFVDGREIKYGVL STSELVSDLYDWKSLYISGRLHKPAKIIIRPEKSDILTAMQVNLQNALHASLLMLPEYFTEEQLYLKITSLSYDGDFRMR FGENKNKNLLKHHQKNVKKSLDIEEVIRVMAFDPNCDERVADAIRDIVFKSSATQREKKLLSWPAMGCSFSKAVIVFYMY LLDLEKTVIIINHTVSNKGSKLYPPDFGYSLHHTKSTPVTSTCRKRKTRFRGLDFYGRMPRLRKAVPLKPMNMKVYFIFL LLSLRSMSNVSQAAFFGDPSCFLVGFLFGIITQDIDIIEDIFEEEEEASDTTTNPCIPDPCNDNGRCVVNGVGEGVTAEC ICNPGYCGDSCTPSTVTTGSNCDANDLCRIPGSICVNDVCVCDCGDIYVDDLKPNTATDTRDACVRDCPNGYSNVFTRYD GNLITDDNGVQLNGIATRAACETECLNYVPFFCRSYEYNDGANRCTLNRARKDDPVRFSTSTAQDFGERDCL |
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