Gene
| Gene Model ID | pfu_aug2.0_746.1_21110 |
|---|---|
| Locus | scaffold746.1 : 75906 ... 101270 : + |
| To GenomeBrowser | scaffold746.1:75906..101270 |
| Genes list of scaffold | scaffold746.1 |
| Synonym | pfu_aug1.0_17614.1_39965 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_746.1_21110.t1 | 1 | 1 | SSB | 48 | 148 | 9.1e-15 | 54.4 | 2.0e-18 | 1.5e-14 | 53.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_746.1_21110.t1 | gi|195452104|ref|XP_002073214.1| | GK14009 [Drosophila willistoni] | 1.0e-12 |
| pfu_aug2.0_746.1_21110.t1 | gi|350539183|ref|NP_001232933.1| | uncharacterized protein LOC100574210 [Acyrthosiphon pisum] | 2.0e-12 |
| pfu_aug2.0_746.1_21110.t1 | gi|194764631|ref|XP_001964432.1| | GF23174 [Drosophila ananassae] | 3.0e-12 |
| pfu_aug2.0_746.1_21110.t1 | gi|195157102|ref|XP_002019435.1| | GL12398 [Drosophila persimilis] | 3.0e-12 |
| pfu_aug2.0_746.1_21110.t1 | gi|749797380|ref|XP_011152144.1| | PREDICTED: single-stranded DNA-binding protein, mitochondrial [Harpegnathos saltator] | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_746.1_21110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_746.1_21110.t1 atgaatggaaaagttaacctaatcggattacttaacggtacacagggctcctgtataactttatctgataaaatggaagc tgaggaatcaatgttgttattattgtctgagtctttctcatcagcaggtgcgactgaagctgttaatcatgttactcttc ttggacgatgtggacaggatccggtgatcagagatgggcaaactactagatatgctattttctcactttgcacggatcaa gttgtacctagagaaggtgatgacccttatataagagctgattggcataaaataatttcttttgcgccctcaacagttaa ttacgtttcaaattacgtgcagagaggtgatcgagtaatggttcaggggagtataggttatcagtttaaaagtggtacgg aacagagagaaaaaataacgtcaataaaagcagccactgtgattgtagtgtctaggaggaataaaaatgcacgtagagat gaagttatcatggaagcaggcgagaaagaagaagattcaagggtggaggaagattctgattataaagagctagaagagga agaagagaaagattcaagggtggaggaagattctgattataaagagaaagatctttga |
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Protein
| Protein ID | pfu_aug2.0_746.1_21110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_746.1_21110.t1 MNGKVNLIGLLNGTQGSCITLSDKMEAEESMLLLLSESFSSAGATEAVNHVTLLGRCGQDPVIRDGQTTRYAIFSLCTDQ VVPREGDDPYIRADWHKIISFAPSTVNYVSNYVQRGDRVMVQGSIGYQFKSGTEQREKITSIKAATVIVVSRRNKNARRD EVIMEAGEKEEDSRVEEDSDYKELEEEEEKDSRVEEDSDYKEKDL |
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