Gene
Gene Model ID | pfu_aug2.0_7468.1_29578 |
---|---|
Locus | scaffold7468.1 : 1 ... 12695 : - |
To GenomeBrowser | scaffold7468.1:1..12695 |
Genes list of scaffold | scaffold7468.1 |
Synonym | pfu_aug1.0_1039.1_43890 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_7468.1_29578.t1 | 2 | 1 | E2F_TDP | 38 | 44 | 3.9e-16 | 58.3 | 6.0 | 15000.0 | -4.6 |
pfu_aug2.0_7468.1_29578.t1 | 2 | 2 | E2F_TDP | 80 | 120 | 3.9e-16 | 58.3 | 1.6e-19 | 3.9e-16 | 58.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_7468.1_29578.t1 | gi|558185111|ref|XP_006128172.1| | PREDICTED: transcription factor E2F4 [Pelodiscus sinensis] | 3.0e-19 |
pfu_aug2.0_7468.1_29578.t1 | gi|558199309|ref|XP_006105126.1| | PREDICTED: transcription factor E2F5 [Myotis lucifugus] | 8.0e-19 |
pfu_aug2.0_7468.1_29578.t1 | gi|554577420|ref|XP_005880437.1| | PREDICTED: transcription factor E2F5, partial [Myotis brandtii] | 2.0e-18 |
pfu_aug2.0_7468.1_29578.t1 | gi|697842577|ref|XP_009641644.1| | PREDICTED: transcription factor E2F4 [Egretta garzetta] | 1.0e-17 |
pfu_aug2.0_7468.1_29578.t1 | gi|697435680|ref|XP_009683789.1| | PREDICTED: transcription factor E2F4 [Struthio camelus australis] | 1.0e-17 |
Transcript
Transcript ID | pfu_aug2.0_7468.1_29578.t1 |
---|---|
Definition | - |
>pfu_aug2.0_7468.1_29578.t1 atgcggctcgtcgtgttgtacaaatcaaaacaaacatggcgagtagcgtacactctcaacagaaaagaaggaaaaacgta cagatactcacatttggatggagaaagcagaaaaaaaaagaaaaaaaaaattaacttcagcttatcctatcagctgcctt caaactgcaatatgaaaaataaaatgtctacgggaaatttcaatgttaatttcaagctgcagccatattgttctccgtgt caacaagccgctgacacattggctgtgagacagaaaagaagaatttatgacattacaaatgttctggaaggcattggcct gattgagaaaaagtccaagaacagcatacagtggaagggagcatgtacaaactacaggggaatctcatctcttgactcag atgggtaa |
Protein
Protein ID | pfu_aug2.0_7468.1_29578.t1 |
---|---|
Definition | - |
>pfu_aug2.0_7468.1_29578.t1 MRLVVLYKSKQTWRVAYTLNRKEGKTYRYSHLDGESRKKKKKKINFSLSYQLPSNCNMKNKMSTGNFNVNFKLQPYCSPC QQAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGACTNYRGISSLDSDG |