Gene
| Gene Model ID | pfu_aug2.0_75.1_16851 |
|---|---|
| Locus | scaffold75.1 : 77136 ... 96660 : + |
| To GenomeBrowser | scaffold75.1:77136..96660 |
| Genes list of scaffold | scaffold75.1 |
| Synonym | pfu_aug1.0_9746.1_31816 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| enzymatic polyprotein endonuclease reverse | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_75.1_16851.t1 | 1 | 1 | 7tm_1 | 2 | 232 | 3.4e-21 | 75.5 | 2.7e-24 | 5.0e-21 | 74.9 |
| pfu_aug2.0_75.1_16851.t1 | 3 | 1 | RVP | 451 | 485 | 1.4e-06 | 28.1 | 0.35 | 660.0 | 0.3 |
| pfu_aug2.0_75.1_16851.t1 | 3 | 2 | RVP | 533 | 624 | 1.4e-06 | 28.1 | 9.8e-09 | 1.8e-05 | 24.5 |
| pfu_aug2.0_75.1_16851.t1 | 2 | 1 | RVT_1 | 857 | 958 | 1.1e-07 | 31.4 | 8.3e-09 | 1.5e-05 | 24.4 |
| pfu_aug2.0_75.1_16851.t1 | 2 | 2 | RVT_1 | 959 | 982 | 1.1e-07 | 31.4 | 0.0063 | 12.0 | 5.2 |
| pfu_aug2.0_75.1_16851.t1 | 3 | 3 | RVP | 1075 | 1084 | 1.4e-06 | 28.1 | 4.7 | 8600.0 | -3.3 |
Transcript
| Transcript ID | pfu_aug2.0_75.1_16851.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16851.t1 atggatgncttcctgtggcaccttgcggttgttgacgccatgaacggcgtcctgctgctttacaacgtcctctataatct ggcgtacttccaaaatttcttcgaatgtctgtttcgttacggatgcgtgcacggcatcaaagtctgctccggcttcttgc ttctagccattggactggaacgatacatcaagatcgtgtacccatttcgatactggtctctactgaatgagaagacagtg acaatctacatttcatgtgtttggaccatggctgtaatcgtggcatttgttccatacctaacttggatagaaaacattcc gactaaagacttttgtcagtatttttcgatactgaaaccggaattcatttggtgcttctgtttattaatggtggttgtac ttatatgtcagtgctttctgtattctcacatcttcataatagcgcgaaatgcatggcgctcagcgccgaaaggcgctctg caacaaggttcctcagttgcgctttggtggacgccgacaaagactgtactaattgtgcttgggacgaacctcgtcacgct tggtccagtaggagcgtacctagtaacagctgtgagtggtgccttggacgactggggagtcatctcaaaaggagtcacgt tagcctacgtagcgacccctggatatgtcaatagcatggtcaatcctttgctttatgctttcaaggtccaagatatttgg gaggccttcacaacaaaattgaagccgtgttcccaaaggaacaaagtacatgacatacagtccttgaaagtactgtgttc taatatgttgtcaatcaaaacgataagtagggcagatcagagtagttttggataccggaagagcattgtaaagcctgcaa catacgacgggaagtcttcctggatagactttaagtcccactttgacatatgtgcggacttgaatgaatggaccactgat gaaaaagggatgtaccttgcagttacattacgcggtggtgcacaggcggtattaggttacttacctgccgcgtcacgtaa agattttactgagctctgcaaagcactagaagacagatatgcccccgccaaccagatggacttgtacagggctcaactta aggacaggaaacaaaaggcttcagagtctgtccccgagttagggcaagatgttcggaggctgacaaacttagcgtatgct aaggcaccctctgatgtacgcgaaactcttgccatggaatactttatagatgcattacacagttccgacatgcgtctcag aattaagcaatcaagacccaagtctttgaatgaggctgtctgccttgcggttgaattagatgcatttaataatgcagaaa agagcagacaagaaataggaggtgtagtttgggcgacagatagctcacaaggcaatgacatgtcaccaatacagacacat aagaggaagtgtgaggctttccttaagcagcaggaaaagaggagtaatgagtctaagaaaggtggtaaggaaggaaaacc aaaagagggtagctcacgctcgctctccttgggatcaattgacagtgctaatagggccggacaaactggcttattcatca atgccgtagtcaatgacaaagcagcaaaactgttggtgcacacaggagcaacagtgacgatagtttcacctgagatagcg ggtaatagaccaattgatgagctccataccaacgtgcttgttgctgatgggactcctctgagaattaaggggaagacgac attgcctgtatctgtagacggcgtatgtacagatcacaatgttgttgtagcagacattggtattgaaggtatacttggcc tggactttatgaagagtcacacctgtcacattgacattgtcaacaattctattactctggatggacgctcagtcaatatg aatatggaagttcaagtcggttgttaccgagttctactggagcagtcagtacatgttccatccatgtcagaagtactcac tctttgtcgtgttcagacaatagatggcaaagttgtatctaatcttgggattggcatggtagaacctatagaaagtttca caaagtcagaccgtggcataacagccagaactctgactgacagcccagataaagtaccagtgcgtataatgaacgtgcaa aacactgaccaaaccatcaagaaaggcacttgtgttgcacagtatacacctgtagctgaggtgttcgtccatgacagttt tctacctggagagaaaacagcagtgcctggtcatttgaaagatctgtacgaggatacgaaatcaagactcagtaatgacc agagtgttgagtttgaaatgttcctcattaagtaccaaagtttgttcgccaaagacgacttggacttgggtagagcggag tcaatcaagcatcgcataaatacaggggatacacatcctattaagcaagctcctaggcgtttacctgaacatatacacgc tgaagtagaaaagcatatagatgctatgcttgagaagaaggtcatacatccctcaaagagcccctggtcatctccaatag tattagccaaaaagaaagatggctcaacacgcttctgtgttgactaccgcaaactgaatgatgtaacaataaaggatgct tatcatttgcctctcattcaggagtggcttgatcatctttctggtgccaagtggttctctaccctcgacctatgcatggg atactgtcaggtggcagtcaatgatgatgacagagagaagactgcatttgcgacaaggaaaggcctctttgaattctcag tcatgcctttcgggctttgcaacgcccctgccacattccaaagactaatggaatcagtacttcgtggattacatgcagga ctcaagctcaaagtcaagaaatgcaaactgtttgcatcggaagtcgagtacttggggcatgtcgtatcagaggctggaat aactacaagcagtgtcaagacgcaatccattgtcaactggccagttcctcagaacgtatctgaagtgagatctttcttgg gattatgcagctattatagacggtttgtacccaactttgcttcagtagctgatcctttacacaagttgacaaagaaagga accgattttgtttggacagaagctagtcaaaacgcatttgacagactgagagaagctttgacatcatcacctatcctggc aaatccagatctatctcagcctttcatactggacactgatgccagcgagcaatcaataggtgcagtactgtcacagaaca taaatggatccgagagggtttgtgcttacgctagcagaactttgtcaaagtcggagcgcaaatactgtgtaactcgcaat gagcttctggctgtcgttcacttccgacagacttcgttaagcattttcgccattacctatatggaaaaaagttcctcata cggacagaccacagctctctgcgctggctcatgcagttcaagaacccggaaaaccaattag |
|
Protein
| Protein ID | pfu_aug2.0_75.1_16851.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16851.t1 MDXFLWHLAVVDAMNGVLLLYNVLYNLAYFQNFFECLFRYGCVHGIKVCSGFLLLAIGLERYIKIVYPFRYWSLLNEKTV TIYISCVWTMAVIVAFVPYLTWIENIPTKDFCQYFSILKPEFIWCFCLLMVVVLICQCFLYSHIFIIARNAWRSAPKGAL QQGSSVALWWTPTKTVLIVLGTNLVTLGPVGAYLVTAVSGALDDWGVISKGVTLAYVATPGYVNSMVNPLLYAFKVQDIW EAFTTKLKPCSQRNKVHDIQSLKVLCSNMLSIKTISRADQSSFGYRKSIVKPATYDGKSSWIDFKSHFDICADLNEWTTD EKGMYLAVTLRGGAQAVLGYLPAASRKDFTELCKALEDRYAPANQMDLYRAQLKDRKQKASESVPELGQDVRRLTNLAYA KAPSDVRETLAMEYFIDALHSSDMRLRIKQSRPKSLNEAVCLAVELDAFNNAEKSRQEIGGVVWATDSSQGNDMSPIQTH KRKCEAFLKQQEKRSNESKKGGKEGKPKEGSSRSLSLGSIDSANRAGQTGLFINAVVNDKAAKLLVHTGATVTIVSPEIA GNRPIDELHTNVLVADGTPLRIKGKTTLPVSVDGVCTDHNVVVADIGIEGILGLDFMKSHTCHIDIVNNSITLDGRSVNM NMEVQVGCYRVLLEQSVHVPSMSEVLTLCRVQTIDGKVVSNLGIGMVEPIESFTKSDRGITARTLTDSPDKVPVRIMNVQ NTDQTIKKGTCVAQYTPVAEVFVHDSFLPGEKTAVPGHLKDLYEDTKSRLSNDQSVEFEMFLIKYQSLFAKDDLDLGRAE SIKHRINTGDTHPIKQAPRRLPEHIHAEVEKHIDAMLEKKVIHPSKSPWSSPIVLAKKKDGSTRFCVDYRKLNDVTIKDA YHLPLIQEWLDHLSGAKWFSTLDLCMGYCQVAVNDDDREKTAFATRKGLFEFSVMPFGLCNAPATFQRLMESVLRGLHAG LKLKVKKCKLFASEVEYLGHVVSEAGITTSSVKTQSIVNWPVPQNVSEVRSFLGLCSYYRRFVPNFASVADPLHKLTKKG TDFVWTEASQNAFDRLREALTSSPILANPDLSQPFILDTDASEQSIGAVLSQNINGSERVCAYASRTLSKSERKYCVTRN ELLAVVHFRQTSLSIFAITYMEKSSSYGQTTALCAGSCSSRTRKTN |
|