Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_75.1_16852
Locus scaffold75.1 : 97949 ... 111935 : -
To GenomeBrowser scaffold75.1:97949..111935
Genes list of scaffold scaffold75.1
Synonym pfu_aug1.0_37278.1_12281

Manual annotation
Annotation by Blast2GO
Annotation GO
cytochrome b-c1 complex subunit mitochondrial GO:0016020 GO:0044699

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_75.1_16852.t1 1 1 UCR_hinge 36 100 8.9e-19 67.2 4.6e-22 1.1e-18 66.8

Transcript
Transcript IDpfu_aug2.0_75.1_16852.t1
Definition-
>pfu_aug2.0_75.1_16852.t1
atggccatggtgcgaggaaacgaacttgttgttgcggctgacccaccagaggatgagccagcacaagaaccagaggagga
tgaggatgaagaagaagaatcaactgatcctcaaaaaatcagtaaagataattgtgaaaaatctggagagtgtgacaaat
ttaaggaaatattagaaaaatgttcacagcgagttagtaacgcatcagaagatgcagaggagacctgtgaagaggaaatg
ctggactttgtacattgtatagatcactgtgcagcaagaggtttattttctcagctgaagtga

Protein
Protein IDpfu_aug2.0_75.1_16852.t1
Definition-
>pfu_aug2.0_75.1_16852.t1
MAMVRGNELVVAADPPEDEPAQEPEEDEDEEEESTDPQKISKDNCEKSGECDKFKEILEKCSQRVSNASEDAEETCEEEM
LDFVHCIDHCAARGLFSQLK

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