Gene
| Gene Model ID | pfu_aug2.0_75.1_16853 |
|---|---|
| Locus | scaffold75.1 : 113796 ... 128639 : + |
| To GenomeBrowser | scaffold75.1:113796..128639 |
| Genes list of scaffold | scaffold75.1 |
| Synonym | pfu_aug1.0_8819.1_45938 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_75.1_16853.t1 | 1 | 1 | MCLC | 173 | 358 | 2.7e-30 | 105.1 | 9.2e-34 | 2.7e-30 | 105.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_75.1_16853.t1 | gi|676423013|ref|XP_009044054.1| | hypothetical protein LOTGIDRAFT_228065 [Lottia gigantea] | 3.0e-40 |
| pfu_aug2.0_75.1_16853.t1 | gi|585680693|ref|XP_006819743.1| | PREDICTED: uncharacterized protein LOC102802867 [Saccoglossus kowalevskii] | 4.0e-35 |
| pfu_aug2.0_75.1_16853.t1 | gi|260831412|ref|XP_002610653.1| | hypothetical protein BRAFLDRAFT_65844 [Branchiostoma floridae] | 2.0e-34 |
| pfu_aug2.0_75.1_16853.t1 | gi|734633712|ref|XP_010745355.1| | PREDICTED: chloride channel CLIC-like protein 1 isoform X2 [Larimichthys crocea] | 7.0e-34 |
| pfu_aug2.0_75.1_16853.t1 | gi|657738324|ref|XP_008328210.1| | PREDICTED: chloride channel CLIC-like protein 1 [Cynoglossus semilaevis] | 2.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_75.1_16853.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16853.t1 atgaagtggtttttaatacatgtagcagtcttcctgattttatttccccatataagcacactacctgatgatgatggtga tgactatatagacccgtttgatatgaccagtgatatgaaaccaaaaccaaagaatccttctctgggaaagagtgatcctc caccaggagataaacaggatatgcatgatagcacaacaacaacaacaacaacagcagaaacaacaacaaaatctccacca tcaccagcagacagccagccagatactagtatactaaaagaagctgaaactgtgggccacatactgacaaagaaacatat tggcacactgcttaaacatctggagggaaggtatcccacagggcattcacaagagtatagcatgttgattaagctgtcca aagacgatatctacgttctgagtagatttgtgcgggaaaataaagggagtttacatgatgtgcacgagattctctcttct atgacgttaagtgtgacagaatcacatttgggaacttttggcaaagtttccttatggtttgaagatagatttggcactag tatcgatgcagctctaaagatgctgatcatcatgctgtgtgcttctatattcactgtattagagatgagactacagattt cctggcgtcagcgctttgtaaagctcattgtactggccttcatcgttagcattcctatgacttggtatgaattgtacaag gctgcagagattgaacagcagacagtagcaatgaaggacgtaccaccagattgtgtgaaggacaatgcagaggagaactg gtttgacactacgctgctggcgttcaaatctttagtaacttttgagaaagacaaatgccagaaatattatgaacatgtgc tgatagatcctttcttgaaggttccacccaccaaagctgtagctgttacttttgtccgtttctttgtttcaccactgaaa gatgtcggtacatcactcagcgagtttatccgggcccttcttattgatctgcccctgactttgtatccagtagccctggc tcttgttaccgttttctttttcttacttctattcatgtggtttggatacagtatcagactgccatttttcctgtctattg aaccaaccccaggttatggggcactcgggggaggggatgcaactcaagtcaacaaagctattgaggaaaatactcaaaaa atgattgaacagattcaagctattcaagaggatatgcatgaaagaaacatcagcatgcaagaaaagattagcaatatgga aaaacttcaaagatttgcactggagcatactcatgccaccccaacagatgatgttagggctccaacacttcagtatgcaa tcttgcccacagcaaagtcaaagtcatctcctgaaatagtcaggaaacgcagggaggaaaatgtcttggaaaatagcttt gaaagttccagtagtgtagagagagcggaagttaaagctccaatcccatgttcagactactcagaaacagatggggaaga aactaaagtgttaactgtaccatctaactctgcacatggcttgtcacgacaatcacctgatcatgatgttagggctccaa cacttcagtatgcaatcttacccacagcaaagtcaaagtcatctcctgaaatagtcaggaaacgcagggaggaaaatgtc ttggaaaatagctttgaaagttccagtagtgtagagagaacggaagttaaagctccaatcccatgttcagactactcaga aacagacggggaagaaactaaagtgttaactgtaccatctaactctgcacatggcttgtcacgacaatcacctgatcgta agagcaagctcccgttgagccttcagaggagctcaagtaaagaaaagggcagctctacctcaggcacatctagtaatcat attgtacaggatagtggagacaatattactgttcacagatctatatctcaacctgaaaccctgggacctgattcctcaca aggtcaaaggggagggaccttttacaaaatgtaa |
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Protein
| Protein ID | pfu_aug2.0_75.1_16853.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16853.t1 MKWFLIHVAVFLILFPHISTLPDDDGDDYIDPFDMTSDMKPKPKNPSLGKSDPPPGDKQDMHDSTTTTTTTAETTTKSPP SPADSQPDTSILKEAETVGHILTKKHIGTLLKHLEGRYPTGHSQEYSMLIKLSKDDIYVLSRFVRENKGSLHDVHEILSS MTLSVTESHLGTFGKVSLWFEDRFGTSIDAALKMLIIMLCASIFTVLEMRLQISWRQRFVKLIVLAFIVSIPMTWYELYK AAEIEQQTVAMKDVPPDCVKDNAEENWFDTTLLAFKSLVTFEKDKCQKYYEHVLIDPFLKVPPTKAVAVTFVRFFVSPLK DVGTSLSEFIRALLIDLPLTLYPVALALVTVFFFLLLFMWFGYSIRLPFFLSIEPTPGYGALGGGDATQVNKAIEENTQK MIEQIQAIQEDMHERNISMQEKISNMEKLQRFALEHTHATPTDDVRAPTLQYAILPTAKSKSSPEIVRKRREENVLENSF ESSSSVERAEVKAPIPCSDYSETDGEETKVLTVPSNSAHGLSRQSPDHDVRAPTLQYAILPTAKSKSSPEIVRKRREENV LENSFESSSSVERTEVKAPIPCSDYSETDGEETKVLTVPSNSAHGLSRQSPDRKSKLPLSLQRSSSKEKGSSTSGTSSNH IVQDSGDNITVHRSISQPETLGPDSSQGQRGGTFYKM |
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