Gene
| Gene Model ID | pfu_aug2.0_75.1_16855 |
|---|---|
| Locus | scaffold75.1 : 176496 ... 190800 : + |
| To GenomeBrowser | scaffold75.1:176496..190800 |
| Genes list of scaffold | scaffold75.1 |
| Synonym | pfu_aug1.0_121681.1_49740 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cholesterol 25-hydroxylase-like | GO:0005506 GO:0006633 GO:0016021 GO:0016491 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_75.1_16855.t1 | 2 | 1 | FA_hydroxylase | 102 | 161 | 1.8e-06 | 28.3 | 0.046 | 680.0 | 0.6 |
| pfu_aug2.0_75.1_16855.t1 | 2 | 2 | FA_hydroxylase | 184 | 297 | 1.8e-06 | 28.3 | 1.2e-10 | 1.8e-06 | 28.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_75.1_16855.t1 | gi|676423691|ref|XP_009044134.1| | hypothetical protein LOTGIDRAFT_103020 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_75.1_16855.t1 | gi|524900961|ref|XP_005106895.1| | PREDICTED: cholesterol 25-hydroxylase-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_75.1_16855.t1 | gi|524900959|ref|XP_005106894.1| | PREDICTED: cholesterol 25-hydroxylase-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_75.1_16855.t1 | gi|585690359|ref|XP_006821049.1| | PREDICTED: cholesterol 25-hydroxylase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_75.1_16855.t1 | gi|260800754|ref|XP_002595262.1| | hypothetical protein BRAFLDRAFT_233012 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_75.1_16855.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16855.t1 atgacagagagaatacgcaaagaggatgaagagatggacagagctccggccaagacagcatttccgatgggggcgtcagc gggacgatcctcacagctggtcttactgtggattataaggactttagtgattttgattatagcaatctgcaagtactatg agacagatgcacagaaagtgatagatgaattttggagtttgttgaaatcttcatggattttcaattccgtttatttcgaa acatggtgggcgactctatgttacgcatggatgattccagtttatccttttgctttacatttcatgacatttttagacaa attcaaagtacatccgtccgtcacgtatattcaccaaagtattattggtatgctcaaagaggcagtatattatatgacac cgctcatgttattagatacttttatcgtgaagaaatattcaggtgtcgatccgtccatttggaacgagaagcgacaatct tggttacagacaactagagctctaccagaggaatcaccgtcattgaatcaaatagtttttcagctcacggcgagcatttt gatgtatgatgcgttattcttcgctatccattttgtcctccacaagaatctgtggctctacaaaaatattcacgcgcttc atcacagacatgacgtcatgcatgcccacgtgaccaatcagctgacgattgttgagagaatcactctcattctatctgct aattttgcactcaaagtctttaacagccacccccttactaggtttttatttgtgccagtttttattttcctcctggttga caatcatacaggctacgacctaccattcggtttacatcacgtgataccgtttgggattatgggaggcccagcgaaacatt atcagcatcacttacatggagccagaaattaccaaccatttttgacgtacttagatcatattgttgaaaagacaaaggga atataa |
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Protein
| Protein ID | pfu_aug2.0_75.1_16855.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16855.t1 MTERIRKEDEEMDRAPAKTAFPMGASAGRSSQLVLLWIIRTLVILIIAICKYYETDAQKVIDEFWSLLKSSWIFNSVYFE TWWATLCYAWMIPVYPFALHFMTFLDKFKVHPSVTYIHQSIIGMLKEAVYYMTPLMLLDTFIVKKYSGVDPSIWNEKRQS WLQTTRALPEESPSLNQIVFQLTASILMYDALFFAIHFVLHKNLWLYKNIHALHHRHDVMHAHVTNQLTIVERITLILSA NFALKVFNSHPLTRFLFVPVFIFLLVDNHTGYDLPFGLHHVIPFGIMGGPAKHYQHHLHGARNYQPFLTYLDHIVEKTKG I |
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