Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_75.1_16857
Locus scaffold75.1 : 199256 ... 236936 : +
To GenomeBrowser scaffold75.1:199256..236936
Genes list of scaffold scaffold75.1
Synonym pfu_aug1.0_6840.1_45521

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_75.1_16857.t2 3 1 MFS_1 18 41 2.3e-35 121.9 0.43 3200.0 -3.5
pfu_aug2.0_75.1_16857.t2 1 1 ATP11 70 197 1.8e-15 57.1 4.2e-19 3.1e-15 56.4
pfu_aug2.0_75.1_16857.t2 3 2 MFS_1 272 499 2.3e-35 121.9 2.2e-35 1.7e-31 109.2
pfu_aug2.0_75.1_16857.t2 3 3 MFS_1 503 571 2.3e-35 121.9 3.6e-08 0.00027 19.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_75.1_16857.t2 gi|58392890|ref|XP_319697.2| AGAP008942-PA [Anopheles gambiae str. PEST] 0.0

Transcript
Transcript IDpfu_aug2.0_75.1_16857.t1
Definition-
>pfu_aug2.0_75.1_16857.t1
atgatacctacttatagctacttgagagtgtgtttgtcatgctggaggaaaatgccagctgccgtcagaatgccgtccaa
atggttcagtaaggagaatggtaacactatgttgacatgcaccagtacctgtggtttgagatggtcgcagatattacatg
gacgtacatacagctcagagcaaaaagaaagtaatgagtacgccatagagagcaatccatactttcaaaaatacaagaaa
aaacttgatgaactgaaagtcttagatccagagaagtacgaggctaaagtgaaagagcttgctgccaaggaaaaagaaat
gaaagagcaaatgaagaaggatttatcaactcctccagagccaaaacctagaacagatgatgatgatagctcagagcctg
gttcatggccacctaagtcattagatgatataatgagaatggaccttgtaatggagagaagtgcagaagaaataggaaag
atttggacagaattccatgtcaccaaagattgtgtatttggagttgttaaggaattagaatataatactctaatggaaag
agcaaagcagtttccaatgcttattgttagtgtattcataaaaacttcatttgataaactaattgatggttttaattgca
ggtcgatatgtcctgaaaatgtcatggcgaagaaaggaatcgttgttgatgatgacgtttacatcaaagtcaaatcagac
gattcaaagaatatagaaggaagacattggactcggtgtgtctgcagtgttatacgaatctcatttttttttcttgtgaa
atacatatttttagataagttgtatcagggatcagtattgtcctcatttttctgggggtataccatgacccagtttctcg
gtggttacctggctgacaggataggaggggacgttgtccttccgatagcagcatgtttctggtctatgatcacgttttgg
acccctcaattagcctacctgtccacagataaatatctgactctacatatactggtagtgtcaagggtattacttggagt
atgtcaaggtttccactatcccagtttcagttccgttatttcaagaaaagtttcagagcatgagcgctctctcacttaca
gttttgtatgtgcaggatcacatttaggtactttattatgtggcagcatgggttctatactacttgaaaaatatggttgg
cagagtgtattttactttgttggtacctgtagtgttgcctggatgttaggtattagatattgcttaatagataaacatag
gagaaagtatatcccgtccagtatttcattagctgataatcaattaactgaaaaagttataccaaaggagaagaaatcag
tgccttggctaacactttttgtaaagccggcattttggtctcttttggtgggccatttttgtgaaaataatgcattttat
attctgttgtcatggttgcccacatttttccatgaaaatttcccagatgccaagggttgggtatttaatgtagtaccatg
gattgtgacaatgtttagctcaatatttagtggttggttagcagatattatgcttcaaaaagccacagccttggtgatgc
tgtcatataccaatacatacggctcagcgttgatattaatggcccttgctgtggcatgttgtggctttcataatagtggc
atactagttaatcctcaagacattgcacccaatcatgcaggctctgtctttggtataatgaatatggcaggtgctatccc
aggttttgtaggtgtttatatggctggccatatactggaagccacaaagagctggggagcagttttcaaccaaacggcag
gggtttgtatgttcggctggttgatatttacagtatttggtactggcaaggcaatagtatga
Transcript IDpfu_aug2.0_75.1_16857.t2
Definition-
>pfu_aug2.0_75.1_16857.t2
atgatacctacttatagctacttgagagtgtgtttgtcatgctggaggaaaatgccagctgccgtcagaatgccgtccaa
atggttcagtaaggagaatggtaacactatgttgacatgcaccagtacctgtggtttgagatggtcgcagatattacatg
gacgtacatacagctcagagcaaaaagaaagtaatgagtacgccatagagagcaatccatactttcaaaaatacaagaaa
aaacttgatgaactgaaagtcttagatccagagaagtacgaggctaaagtgaaagagcttgctgccaaggaaaaagaaat
gaaagagcaaatgaagaaggatttatcaactcctccagagccaaaacctagaacagatgatgatgatagctcagagcctg
gttcatggccacctaagtcattagatgatataatgagaatggaccttgtaatggagagaagtgcagaagaaataggaaag
atttggacagaattccatgtcaccaaagattgtgtatttggagttgttaaggaattagaatataatactctaatggaaag
agcaaagcagtttccaatgcttattgttagtgtattcataaaaacttcatttgataaactaattgatggttttaattgca
ggtcgatatgtcctgaaaatgtcatggcgaagaaaggaatcgttgttgatgatgacgtttacatcaaagtcaaatcagac
gattcaaagaatatagaaggaagacattggactcggtgtgtctgcagtgttatacgaatctcatttttttttcttgtgaa
atacatatttttagataagttgtatcagggatcagtattgtcctcatttttctgggggtataccatgacccagtttctcg
gtggttacctggctgacaggataggaggggacgttgtccttccgatagcagcatgtttctggtctatgatcacgttttgg
acccctcaattagcctacctgtccacagataaatatctgactctacatatactggtagtgtcaagggtattacttggagt
atgtcaaggtttccactatcccagtttcagttccgttatttcaagaaaagtttcagagcatgagcgctctctcacttaca
gttttgtatgtgcaggatcacatttaggtactttattatgtggcagcatgggttctatactacttgaaaaatatggttgg
cagagtgtattttactttgttggtacctgtagtgttgcctggatgttaggtattagatattgcttaatagataaacatag
gagaaagtatatcccgtccagtatttcattagctgataatcaattaactgaaaaagttataccaaaggagaagaaatcag
tgccttggctaacactttttgtaaagccggcattttggtctcttttggtgggccatttttgtgaaaataatgcattttat
attctgttgtcatggttgcccacatttttccatgaaaatttcccagatgccaagggttggacaatagctttatgtggtac
agccacagccttggtgatgctgtcatataccaatacatacggctcagcgttgatattaatggcccttgctgtggcatgtt
gtggctttcataatagtggcatactagttaatcctcaagacattgcacccaatcatgcaggctctgtctttggtataatg
aatatggcaggtgctatcccaggttttgtaggtgtttatatggctggccatatactggaagccacaaagagctggggagc
agttttcaaccaaacggcaggggtttgtatgttcggctggttgatatttacagtatttggtactggcaaggcaatagtat
ga

Protein
Protein IDpfu_aug2.0_75.1_16857.t1
Definition-
>pfu_aug2.0_75.1_16857.t1
MIPTYSYLRVCLSCWRKMPAAVRMPSKWFSKENGNTMLTCTSTCGLRWSQILHGRTYSSEQKESNEYAIESNPYFQKYKK
KLDELKVLDPEKYEAKVKELAAKEKEMKEQMKKDLSTPPEPKPRTDDDDSSEPGSWPPKSLDDIMRMDLVMERSAEEIGK
IWTEFHVTKDCVFGVVKELEYNTLMERAKQFPMLIVSVFIKTSFDKLIDGFNCRSICPENVMAKKGIVVDDDVYIKVKSD
DSKNIEGRHWTRCVCSVIRISFFFLVKYIFLDKLYQGSVLSSFFWGYTMTQFLGGYLADRIGGDVVLPIAACFWSMITFW
TPQLAYLSTDKYLTLHILVVSRVLLGVCQGFHYPSFSSVISRKVSEHERSLTYSFVCAGSHLGTLLCGSMGSILLEKYGW
QSVFYFVGTCSVAWMLGIRYCLIDKHRRKYIPSSISLADNQLTEKVIPKEKKSVPWLTLFVKPAFWSLLVGHFCENNAFY
ILLSWLPTFFHENFPDAKGWVFNVVPWIVTMFSSIFSGWLADIMLQKATALVMLSYTNTYGSALILMALAVACCGFHNSG
ILVNPQDIAPNHAGSVFGIMNMAGAIPGFVGVYMAGHILEATKSWGAVFNQTAGVCMFGWLIFTVFGTGKAIV
Protein IDpfu_aug2.0_75.1_16857.t2
Definition-
>pfu_aug2.0_75.1_16857.t2
MIPTYSYLRVCLSCWRKMPAAVRMPSKWFSKENGNTMLTCTSTCGLRWSQILHGRTYSSEQKESNEYAIESNPYFQKYKK
KLDELKVLDPEKYEAKVKELAAKEKEMKEQMKKDLSTPPEPKPRTDDDDSSEPGSWPPKSLDDIMRMDLVMERSAEEIGK
IWTEFHVTKDCVFGVVKELEYNTLMERAKQFPMLIVSVFIKTSFDKLIDGFNCRSICPENVMAKKGIVVDDDVYIKVKSD
DSKNIEGRHWTRCVCSVIRISFFFLVKYIFLDKLYQGSVLSSFFWGYTMTQFLGGYLADRIGGDVVLPIAACFWSMITFW
TPQLAYLSTDKYLTLHILVVSRVLLGVCQGFHYPSFSSVISRKVSEHERSLTYSFVCAGSHLGTLLCGSMGSILLEKYGW
QSVFYFVGTCSVAWMLGIRYCLIDKHRRKYIPSSISLADNQLTEKVIPKEKKSVPWLTLFVKPAFWSLLVGHFCENNAFY
ILLSWLPTFFHENFPDAKGWTIALCGTATALVMLSYTNTYGSALILMALAVACCGFHNSGILVNPQDIAPNHAGSVFGIM
NMAGAIPGFVGVYMAGHILEATKSWGAVFNQTAGVCMFGWLIFTVFGTGKAIV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495