Gene
| Gene Model ID | pfu_aug2.0_75.1_16862 |
|---|---|
| Locus | scaffold75.1 : 314216 ... 319840 : + |
| To GenomeBrowser | scaffold75.1:314216..319840 |
| Genes list of scaffold | scaffold75.1 |
| Synonym | pfu_aug1.0_32522.1_62707 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_75.1_16862.t1 | 1 | 1 | zf-LITAF-like | 82 | 119 | 9.2e-10 | 38.2 | 1.9e-13 | 1.4e-09 | 37.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_75.1_16862.t1 | gi|524911213|ref|XP_005110474.1| | PREDICTED: cell death-inducing p53-target protein 1 homolog isoform X1 [Aplysia californica] | 2.0e-14 |
| pfu_aug2.0_75.1_16862.t1 | gi|524911215|ref|XP_005110475.1| | PREDICTED: cell death-inducing p53-target protein 1 homolog isoform X2 [Aplysia californica] | 2.0e-12 |
| pfu_aug2.0_75.1_16862.t1 | gi|470270334|ref|XP_004362688.1| | IPT/TIG domain-containing protein [Dictyostelium fasciculatum] | 3.0e-11 |
| pfu_aug2.0_75.1_16862.t1 | gi|156389494|ref|XP_001635026.1| | predicted protein [Nematostella vectensis] | 2.0e-09 |
| pfu_aug2.0_75.1_16862.t1 | gi|524886536|ref|XP_005099861.1| | PREDICTED: cell death-inducing p53-target protein 1-like isoform X2 [Aplysia californica] | 3.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_75.1_16862.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16862.t1 atggcgccccatagatctgcgcatttcgaaatcggagcaaccataaaggatttatatcggggaaaatacagcactctcat cgttaacatgtcacaacaacctcctcctccccctgggtacggggcaccaccggcatatcccccaccaggacaggggtatg cccctcccccacagggatatcctgctcaaggacagcagaccacggtggtgatggcccagccggtggtggcggggatgatg ttcagggaggcacctgtagcaatgcagtgtccttactgtagcgccagcatcaccacatctaccacatacgagacgggaac catgacctgggtcatcgctggcatccttctattgtttgggtaa |
|
Protein
| Protein ID | pfu_aug2.0_75.1_16862.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16862.t1 MAPHRSAHFEIGATIKDLYRGKYSTLIVNMSQQPPPPPGYGAPPAYPPPGQGYAPPPQGYPAQGQQTTVVMAQPVVAGMM FREAPVAMQCPYCSASITTSTTYETGTMTWVIAGILLLFG |
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