Gene
| Gene Model ID | pfu_aug2.0_75.1_16863 |
|---|---|
| Locus | scaffold75.1 : 321136 ... 327516 : + |
| To GenomeBrowser | scaffold75.1:321136..327516 |
| Genes list of scaffold | scaffold75.1 |
| Synonym | pfu_aug1.0_19907.1_69311 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_75.1_16863.t1 | 1 | 1 | zf-LITAF-like | 53 | 125 | 9.0e-28 | 95.9 | 8.4e-31 | 1.2e-27 | 95.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_75.1_16863.t1 | gi|291239466|ref|XP_002739641.1| | PREDICTED: lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Saccoglossus kowalevskii] | 4.0e-30 |
| pfu_aug2.0_75.1_16863.t1 | gi|676474775|ref|XP_009060251.1| | hypothetical protein LOTGIDRAFT_183215 [Lottia gigantea] | 4.0e-30 |
| pfu_aug2.0_75.1_16863.t1 | gi|524886534|ref|XP_005099860.1| | PREDICTED: cell death-inducing p53-target protein 1-like isoform X1 [Aplysia californica] | 3.0e-29 |
| pfu_aug2.0_75.1_16863.t1 | gi|676474773|ref|XP_009060250.1| | hypothetical protein LOTGIDRAFT_183210 [Lottia gigantea] | 3.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_75.1_16863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16863.t1 atgtctaaagccgcccctcctccacctccgggatacggagcccctgaacccccgaaatacggagtacctcccccggctta ccaacaaactcaaggaacatatcagaccaatgtggtggttacaggcgccacaccatacttaagaaacatgatgttccggg aagttcctgtggccacacaatgtcctttctgtcaggctacgatcaccacctccacctcatacgagacaggaacgatcacg tggctggtcgctggcatcctacttctcatgggactatggttgggatgctgtctgataccgttctgtctggatggctgtaa agacgtgatccatcgatgccctaactgtaaccaagtggtcggcaaatacacaaggatgtga |
|
Protein
| Protein ID | pfu_aug2.0_75.1_16863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16863.t1 MSKAAPPPPPGYGAPEPPKYGVPPPAYQQTQGTYQTNVVVTGATPYLRNMMFREVPVATQCPFCQATITTSTSYETGTIT WLVAGILLLMGLWLGCCLIPFCLDGCKDVIHRCPNCNQVVGKYTRM |
|