Gene
| Gene Model ID | pfu_aug2.0_75.1_16866 |
|---|---|
| Locus | scaffold75.1 : 379114 ... 430795 : + |
| To GenomeBrowser | scaffold75.1:379114..430795 |
| Genes list of scaffold | scaffold75.1 |
| Synonym | pfu_aug1.0_406.1_65408 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| paired box protein splice variant | GO:0001708 GO:0003700 GO:0005634 GO:0006357 GO:0007422 GO:0009880 GO:0010605 GO:0021588 GO:0030878 GO:0030901 GO:0030917 GO:0031324 GO:0035775 GO:0043049 GO:0043565 GO:0048596 GO:0060118 GO:0072114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_75.1_16866.t2 | 1 | 1 | PAX | 14 | 138 | 0.0 | 237.5 | 0.0 | 0.0 | 237.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_75.1_16866.t2 | gi|283464161|gb|ADB22664.1| | paired box protein 2/5/8 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_75.1_16866.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16866.t1 atgatggagacgactgaagcggtacgggcgctgacacccaaaccggaggacgaagaggagggggaggtgatggtgtccca ggtggaggatcagctacccccagaccacctacccccagatcatcccgagcacataggacaaccgaccatcatcaccatga tcccggtgccacatgtggtgacagaggctcaagctcaagtactgcaggaacttagccaacagcaacagcaattcacagaa aataacaacaccataatcttagacaccaatggcaataatagtgtgaatgtgaataaagtgacaggcaaaggccatggtgg tgtaaatcagttgggcggggtgtttgtgaacgggcgccccctgccggacgtggtccgtcagaggattgtggagttggccc atcagggggtacgcccctgtgacatctcacggcaattacgggtatcacatggctgtgttagtaaaattttaggaagatac tacgaaacggggtcaatcaaacctggagttatagggggttcaaaaccgaaagtagccacacccaaagttgtagacgccat aacaaggtacaagcatgagaacccaactatgtttgcctgggagatacgggacagattattggcggagggcgtgtgcacgt cagaaaacgtccccagtgtcagctctatcaacagaattgttcgaaacaaagcggcagagaatgccaaacattccccaggg cagacgagtccctccctgtcaaacgacgcaggcagtccccctttgtcacacacccatcaaccctcacctaatggtgacgg gatcccaagggcatcagccccatcctactctataactgggatcctaggaatctcacagggacaaaatccccagggtatgg tggatgctaactcaaataaacgaaagagggaaaaccagcctggtgatagcaccagttacacgggttccctcccctcgtat caaagccaagcggtggtggcgccagtggtaccacctttagtaatatccagtggcaactatagtccagccaatccaccctc tggcggggagtactataatgcggtaccttacacacagtatcaagcagcacagtatgatccctcctggggtctaaggtact cggcccctgctgcggcaggacttctaaacacgccatactattatcagacagccgtctcagggagaaatgagcccactact acaaatgcggcccctgtccccgctacgcaacagccacaacaacctccccaacagcagcaacaacaggccccaccccaggc ggcaagtccccctaaaacgtag |
|
| Transcript ID | pfu_aug2.0_75.1_16866.t2 |
| Definition | - |
>pfu_aug2.0_75.1_16866.t2 atggtaaccgaattggatctaggctgcattggttttactggccatggtggtgtaaatcagttgggcggggtgtttgtgaa cgggcgccccctgccggacgtggtccgtcagaggattgtggagttggcccatcagggggtacgcccctgtgacatctcac ggcaattacgggtatcacatggctgtgttagtaaaattttaggaagatactacgaaacggggtcaatcaaacctggagtt atagggggttcaaaaccgaaagtagccacacccaaagttgtagacgccataacaaggtacaagcatgagaacccaactat gtttgcctgggagatacgggacagattattggcggagggcgtgtgcacgtcagaaaacgtccccagtgtcagctctatca acagaattgttcgaaacaaagcggcagagaatgccaaacattccccagggcagacgagtccctccctgtcaaacgacgca ggcagtccccctttgtcacacacccatcaaccctcacctaatggtgacgggatcccaagggcatcagccccatcctactc tataactgggatcctaggaatctcacagggacaaaatccccagggtatggtggatgctaactcaaataaacgaaagaggg aaaaccagcctggtgatagcaccagttacacgggttccctcccctcgtatcaaagccaagcggtggtggcgccagtggta ccacctttagtaatatccagtggcaactatagtccagccaatccaccctctggcggggagtactataatgcggtacctta cacacagtatcaagcagcacagtatgatccctcctggggtctaaggtactcggcccctgctgcggcaggacttctaaaca cgccatactattatcagacagccgtctcagggagaaatgagcccactactacaaatgcggcccctgtccccgctacgcaa cagccacaacaacctccccaacagcagcaacaacaggccccaccccaggcggcaagtccccctaaaacgtag |
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Protein
| Protein ID | pfu_aug2.0_75.1_16866.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_75.1_16866.t1 MMETTEAVRALTPKPEDEEEGEVMVSQVEDQLPPDHLPPDHPEHIGQPTIITMIPVPHVVTEAQAQVLQELSQQQQQFTE NNNTIILDTNGNNSVNVNKVTGKGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRY YETGSIKPGVIGGSKPKVATPKVVDAITRYKHENPTMFAWEIRDRLLAEGVCTSENVPSVSSINRIVRNKAAENAKHSPG QTSPSLSNDAGSPPLSHTHQPSPNGDGIPRASAPSYSITGILGISQGQNPQGMVDANSNKRKRENQPGDSTSYTGSLPSY QSQAVVAPVVPPLVISSGNYSPANPPSGGEYYNAVPYTQYQAAQYDPSWGLRYSAPAAAGLLNTPYYYQTAVSGRNEPTT TNAAPVPATQQPQQPPQQQQQQAPPQAASPPKT |
|
| Protein ID | pfu_aug2.0_75.1_16866.t2 |
| Definition | - |
>pfu_aug2.0_75.1_16866.t2 MVTELDLGCIGFTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPGV IGGSKPKVATPKVVDAITRYKHENPTMFAWEIRDRLLAEGVCTSENVPSVSSINRIVRNKAAENAKHSPGQTSPSLSNDA GSPPLSHTHQPSPNGDGIPRASAPSYSITGILGISQGQNPQGMVDANSNKRKRENQPGDSTSYTGSLPSYQSQAVVAPVV PPLVISSGNYSPANPPSGGEYYNAVPYTQYQAAQYDPSWGLRYSAPAAAGLLNTPYYYQTAVSGRNEPTTTNAAPVPATQ QPQQPPQQQQQQAPPQAASPPKT |
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