Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_75.1_16869
Locus scaffold75.1 : 519449 ... 526678 : -
To GenomeBrowser scaffold75.1:519449..526678
Genes list of scaffold scaffold75.1
Synonym pfu_aug1.0_26169.1_26283

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_75.1_16869.t1 gi|676437410|ref|XP_009048195.1| hypothetical protein LOTGIDRAFT_238345, partial [Lottia gigantea] 7.0e-23
pfu_aug2.0_75.1_16869.t1 gi|752892118|ref|XP_011264127.1| PREDICTED: ER membrane protein complex subunit 1 isoform X1 [Camponotus floridanus] 8.0e-22
pfu_aug2.0_75.1_16869.t1 gi|752892120|ref|XP_011264128.1| PREDICTED: ER membrane protein complex subunit 1 isoform X2 [Camponotus floridanus] 9.0e-22
pfu_aug2.0_75.1_16869.t1 gi|749773967|ref|XP_011142308.1| PREDICTED: ER membrane protein complex subunit 1 isoform X1 [Harpegnathos saltator] 7.0e-21
pfu_aug2.0_75.1_16869.t1 gi|749773970|ref|XP_011142310.1| PREDICTED: ER membrane protein complex subunit 1 isoform X2 [Harpegnathos saltator] 7.0e-21

Transcript
Transcript IDpfu_aug2.0_75.1_16869.t1
Definition-
>pfu_aug2.0_75.1_16869.t1
atgggacaggtccattcctgccttactataagtcctacatcaaccaaacttctgtggatgttgcatctaaggatgcttaa
tgcaatgtatggaacagatgctgcatctgacccacattccatgcttgagcaatcaggccaagtaaaatgggacaggtcca
tttccggcctattgtacagatgctggtcatgggacaatgatgccgtggaggaaaatgggcatggcctgatatttgctttt
aaccccatcaatggtgagccagtgcagtcccccggagctcagaccctggggtacaaacttctacaggccactctgattgg
agagatggacgattacttcctgagaggtgttctcttaatggacacagataacaagttgcacacctaccctcccagttgtt
cctccctggtcagggatagagcatcatctttatttatgttcctggctgatgtagaaacaggacttataaatggattcagg
actgttccaagtaaaggggagctgactgcagagaaagtatggacggtaaatctacagaagaaacaacaaaccataactaa
catagtggccaagagacctctaggtaaatctaaacgtactgaacagagcacggatgacgtcattgtgcatatgaccgaat
catccaatatccgacacagggtagagaaagttatatcgctattgaatccttcacccttttactatggtggctcaaaatca
cgttcaagtcgttcacatcatacacaccgctcgcatcataccaaccatacaagcagttcaggtcgaagttcaagtaaact
tacagcaatattagcagaacatagtgctcgtctagcagccgctaaaagcagagataattttgcagatcaagatgcaaatc
ttttgcgcaaggaagcaaaccttaaagcggaacaactcctattcttctgcaaagaggaagtgtacgaaagccgaagctag

Protein
Protein IDpfu_aug2.0_75.1_16869.t1
Definition-
>pfu_aug2.0_75.1_16869.t1
MGQVHSCLTISPTSTKLLWMLHLRMLNAMYGTDAASDPHSMLEQSGQVKWDRSISGLLYRCWSWDNDAVEENGHGLIFAF
NPINGEPVQSPGAQTLGYKLLQATLIGEMDDYFLRGVLLMDTDNKLHTYPPSCSSLVRDRASSLFMFLADVETGLINGFR
TVPSKGELTAEKVWTVNLQKKQQTITNIVAKRPLGKSKRTEQSTDDVIVHMTESSNIRHRVEKVISLLNPSPFYYGGSKS
RSSRSHHTHRSHHTNHTSSSGRSSSKLTAILAEHSARLAAAKSRDNFADQDANLLRKEANLKAEQLLFFCKEEVYESRS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495