Gene
| Gene Model ID | pfu_aug2.0_753.1_11163 |
|---|---|
| Locus | scaffold753.1 : 155007 ... 179465 : - |
| To GenomeBrowser | scaffold753.1:155007..179465 |
| Genes list of scaffold | scaffold753.1 |
| Synonym | pfu_aug1.0_1169.1_36860 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cugbp elav-like family member 6 isoform x1 | GO:0000166 GO:0003676 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_753.1_11163.t2 | 1 | 1 | RRM_1 | 62 | 100 | 2.2e-07 | 30.3 | 7.7e-11 | 3.8e-07 | 29.6 |
Transcript
| Transcript ID | pfu_aug2.0_753.1_11163.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_753.1_11163.t1 atgatgaaggatgacgtattcacatctttagatcattcacagacggccagctggatcattttaaccatgtctgatagtga actggaaggagggagcatcaagcggacccgattgtccaccttcggcacagaggagggggagtgtatcaaggtccgctgtc tacaggtacactcggacgacaaggaagtgaacagaactatgaatggacaagtccagaagacggagccagatccagatgcc atcaaaatgttcgtaggacagattccacggtctatggacgagaatgacttacggaaaatgtttgaagaatttggttcagt gtttcagttgaacgtactccgcgacaaagcatcggggcagagcaaggagatcttcgcaaaagacaatgtttcggttacct ttgtctttaaggggcttattagaaacccgatccctgtgttaggggcaacaactcccgtgttgatttttctacagaatgct atcgggttgttgctttgtcacgttttacactag |
|
| Transcript ID | pfu_aug2.0_753.1_11163.t2 |
| Definition | - |
>pfu_aug2.0_753.1_11163.t2 atgtctgatagtgaactggaaggagggagcatcaagcggacccgattgtccaccttcggcacagaggagggggagtgtat caaggtccgctgtctacaggtacactcggacgacaaggaagtgaacagaactatgaatggacaagtccagaagacggagc cagatccagatgccatcaaaatgttcgtaggacagattccacggtctatggacgagaatgacttacggaaaatgtttgaa gaatttggttcagtgtttcagttgaacgtactccgcgacaaagcatcggggcagagcaaggagatcttcgcaaaagacaa tgtttcggttacctttgtctttaaggggcttattagaaacccgatccctgtgttaggggcaacaactcccgtgttgattt ttctacagaatgctatcgggttgttgctttgtcacgttttacactag |
|
Protein
| Protein ID | pfu_aug2.0_753.1_11163.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_753.1_11163.t1 MMKDDVFTSLDHSQTASWIILTMSDSELEGGSIKRTRLSTFGTEEGECIKVRCLQVHSDDKEVNRTMNGQVQKTEPDPDA IKMFVGQIPRSMDENDLRKMFEEFGSVFQLNVLRDKASGQSKEIFAKDNVSVTFVFKGLIRNPIPVLGATTPVLIFLQNA IGLLLCHVLH |
|
| Protein ID | pfu_aug2.0_753.1_11163.t2 |
| Definition | - |
>pfu_aug2.0_753.1_11163.t2 MSDSELEGGSIKRTRLSTFGTEEGECIKVRCLQVHSDDKEVNRTMNGQVQKTEPDPDAIKMFVGQIPRSMDENDLRKMFE EFGSVFQLNVLRDKASGQSKEIFAKDNVSVTFVFKGLIRNPIPVLGATTPVLIFLQNAIGLLLCHVLH |
|