Gene
| Gene Model ID | pfu_aug2.0_754.1_14523 |
|---|---|
| Locus | scaffold754.1 : 43275 ... 50925 : - |
| To GenomeBrowser | scaffold754.1:43275..50925 |
| Genes list of scaffold | scaffold754.1 |
| Synonym | pfu_aug1.0_31420.1_19406 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_754.1_14523.t1 | 1 | 1 | DHDPS | 64 | 196 | 6.4e-13 | 47.9 | 5.8e-17 | 8.6e-13 | 47.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_754.1_14523.t1 | gi|524890120|ref|XP_005101609.1| | PREDICTED: N-acetylneuraminate lyase-like [Aplysia californica] | 2.0e-30 |
| pfu_aug2.0_754.1_14523.t1 | gi|676428461|ref|XP_009045283.1| | hypothetical protein LOTGIDRAFT_230121 [Lottia gigantea] | 4.0e-23 |
| pfu_aug2.0_754.1_14523.t1 | gi|676495626|ref|XP_009066950.1| | hypothetical protein LOTGIDRAFT_176288, partial [Lottia gigantea] | 1.0e-22 |
| pfu_aug2.0_754.1_14523.t1 | gi|632956052|ref|XP_007893769.1| | PREDICTED: N-acetylneuraminate lyase isoform X3 [Callorhinchus milii] | 2.0e-17 |
| pfu_aug2.0_754.1_14523.t1 | gi|632956050|ref|XP_007893768.1| | PREDICTED: N-acetylneuraminate lyase isoform X2 [Callorhinchus milii] | 3.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_754.1_14523.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_754.1_14523.t1 atgcacgcagtatttgagagacgtgcagaaattccaatgtcttttcgtgaatggtacatctggagagagtgtatccttaa ctgtagacgaaaggaaggaattagcaagaaagtggaagaccgcttcaacgggaagaatcccgatgattttacatattgga accgggaatttaaaggatacaaaggccttgaggctatagttgattacatgagtgaggtgacgtcatcagcaccggacata ccaatgttctactacagtattgactttatgaccaacgtttatctaaatgaggtagaagtaatgagactcgggacagagag gattccaactctggcgggaatgaagttcacaacctctgacctagtgagtgcatttaattgtaagcagatagacgacaagc tgcagatactggtgggcactgacacacaatttctgccatgcctcagcctcggtttagataaaccaatcatgtctccattt atgggcagcctatttcataacactaaagaggcgtttaatataggaaacatagaaaaggcgcgagatctacagaaagatgt gattcacattaactccataagaatgaagtatgcaactgattgtgcctgtgattcacccgagtgtacctgtgtagcacctg agtgtacctgtgtagcacctgattgtgcctgtgattcacctgagtgtacctgtgtagcacctgattgtgcctgtgattca cctgagtgttcctatgtagcaactgattgtgcctgtgattcacccgagtgtacctgtgtagcacctaagtgtacctgtgt agcacctgattgtgcctgtgattcacctgagtgtacctgtgtatcacctgatttcacctggatgtcacttgattgttctt gtttttcatttgaatctacatacgtaccacctgcttgtgtctgtgccagctcaatggttgtatgttaa |
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Protein
| Protein ID | pfu_aug2.0_754.1_14523.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_754.1_14523.t1 MHAVFERRAEIPMSFREWYIWRECILNCRRKEGISKKVEDRFNGKNPDDFTYWNREFKGYKGLEAIVDYMSEVTSSAPDI PMFYYSIDFMTNVYLNEVEVMRLGTERIPTLAGMKFTTSDLVSAFNCKQIDDKLQILVGTDTQFLPCLSLGLDKPIMSPF MGSLFHNTKEAFNIGNIEKARDLQKDVIHINSIRMKYATDCACDSPECTCVAPECTCVAPDCACDSPECTCVAPDCACDS PECSYVATDCACDSPECTCVAPKCTCVAPDCACDSPECTCVSPDFTWMSLDCSCFSFESTYVPPACVCASSMVVC |
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