Gene
| Gene Model ID | pfu_aug2.0_754.1_14530 |
|---|---|
| Locus | scaffold754.1 : 137636 ... 142674 : + |
| To GenomeBrowser | scaffold754.1:137636..142674 |
| Genes list of scaffold | scaffold754.1 |
| Synonym | pfu_aug1.0_92815.1_56826 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_754.1_14530.t1 | 1 | 1 | Tom22 | 20 | 106 | 4.0e-12 | 45.8 | 3.4e-16 | 5.1e-12 | 45.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_754.1_14530.t1 | gi|676428397|ref|XP_009045262.1| | hypothetical protein LOTGIDRAFT_110138, partial [Lottia gigantea] | 8.0e-27 |
| pfu_aug2.0_754.1_14530.t1 | gi|752862097|ref|XP_011260948.1| | PREDICTED: mitochondrial import receptor subunit TOM22 homolog [Camponotus floridanus] | 6.0e-21 |
| pfu_aug2.0_754.1_14530.t1 | gi|637301032|ref|XP_003221021.2| | PREDICTED: mitochondrial import receptor subunit TOM22 homolog [Anolis carolinensis] | 5.0e-14 |
| pfu_aug2.0_754.1_14530.t1 | gi|585674750|ref|XP_006890179.1| | PREDICTED: mitochondrial import receptor subunit TOM22 homolog [Elephantulus edwardii] | 7.0e-14 |
| pfu_aug2.0_754.1_14530.t1 | gi|632989599|ref|XP_007883734.1| | PREDICTED: mitochondrial import receptor subunit TOM22 homolog [Callorhinchus milii] | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_754.1_14530.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_754.1_14530.t1 atgaccacagaaccaaaaataattgatctgtcagacgctggaccaattaaggccatcgaggatgaagaggatgatgatga cattgaagagacttttacagaaaggctaataggcttaacagagatgttcccagaatctcttagaaactttatgggtactg tcacaacatatgcatggaagactacgaagtggacgtatggattttctcagagtgcattgtggataatgaccactgccgct acgatagctgtactgccggttatgctagagaatgaaagatcacaaatggtcgagcagcagaagcagcaagaaagacaaat tttactgggtccacatgcagcagtatcaggtcaacaaggaatgttcccaggaatgatgcctcagtcccctcctggcatgg ctccacccccaccaccatcttaa |
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Protein
| Protein ID | pfu_aug2.0_754.1_14530.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_754.1_14530.t1 MTTEPKIIDLSDAGPIKAIEDEEDDDDIEETFTERLIGLTEMFPESLRNFMGTVTTYAWKTTKWTYGFSQSALWIMTTAA TIAVLPVMLENERSQMVEQQKQQERQILLGPHAAVSGQQGMFPGMMPQSPPGMAPPPPPS |
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