Gene
| Gene Model ID | pfu_aug2.0_755.1_17802 |
|---|---|
| Locus | scaffold755.1 : 144676 ... 145931 : + |
| To GenomeBrowser | scaffold755.1:144676..145931 |
| Genes list of scaffold | scaffold755.1 |
| Synonym | pfu_aug1.0_506.1_58154 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cugbp elav-like family member partial | GO:0000166 GO:0003676 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_755.1_17802.t1 | 1 | 1 | RRM_1 | 1 | 54 | 4.6e-15 | 54.9 | 1.9e-18 | 5.5e-15 | 54.7 |
| pfu_aug2.0_755.1_17802.t1 | 1 | 1 | RRM_5 | 2 | 57 | 5.0e-09 | 35.8 | 2.1e-12 | 6.2e-09 | 35.5 |
| pfu_aug2.0_755.1_17802.t1 | 1 | 1 | RRM_6 | 2 | 54 | 2.2e-08 | 33.9 | 1.1e-11 | 3.3e-08 | 33.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_755.1_17802.t1 | gi|697026362|ref|XP_009575006.1| | PREDICTED: CUGBP Elav-like family member 6 [Fulmarus glacialis] | 3.0e-40 |
| pfu_aug2.0_755.1_17802.t1 | gi|704458349|ref|XP_010076606.1| | PREDICTED: CUGBP Elav-like family member 6, partial [Pterocles gutturalis] | 3.0e-40 |
| pfu_aug2.0_755.1_17802.t1 | gi|704251844|ref|XP_010148172.1| | PREDICTED: CUGBP Elav-like family member 6, partial [Eurypyga helias] | 4.00001e-40 |
| pfu_aug2.0_755.1_17802.t1 | gi|675629430|ref|XP_008943202.1| | PREDICTED: CUGBP Elav-like family member 6, partial [Merops nubicus] | 4.00001e-40 |
| pfu_aug2.0_755.1_17802.t1 | gi|699676125|ref|XP_009901777.1| | PREDICTED: CUGBP Elav-like family member 4 [Picoides pubescens] | 2.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_755.1_17802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_755.1_17802.t1 atgttcatgccattcggaaacgtcattagtgctaaagtttacgtcgatcgagcaaccaatcagagcaaatgctttggatt tgtgagttttgacaacccaacgagtgctcaagcggccatacaggccatgaatggattccagataggaatgaagcgtctaa aagttcaactcaaacgcccaaaggacgcaaatcgtccatactag |
|
Protein
| Protein ID | pfu_aug2.0_755.1_17802.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_755.1_17802.t1 MFMPFGNVISAKVYVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY |
|