Gene
| Gene Model ID | pfu_aug2.0_756.1_21118 |
|---|---|
| Locus | scaffold756.1 : 26576 ... 44952 : + |
| To GenomeBrowser | scaffold756.1:26576..44952 |
| Genes list of scaffold | scaffold756.1 |
| Synonym | pfu_aug1.0_5004.1_52420 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_756.1_21118.t2 | 2 | 1 | Na_sulph_symp | 22 | 442 | 0.0 | 265.0 | 0.0 | 0.0 | 207.3 |
| pfu_aug2.0_756.1_21118.t2 | 3 | 1 | CitMHS | 47 | 165 | 4.6e-09 | 35.3 | 4.4e-07 | 0.0032 | 16.0 |
| pfu_aug2.0_756.1_21118.t2 | 3 | 2 | CitMHS | 229 | 375 | 4.6e-09 | 35.3 | 3.0e-08 | 0.00022 | 19.9 |
| pfu_aug2.0_756.1_21118.t2 | 3 | 3 | CitMHS | 440 | 518 | 4.6e-09 | 35.3 | 8.3e-05 | 0.62 | 8.5 |
| pfu_aug2.0_756.1_21118.t2 | 2 | 2 | Na_sulph_symp | 441 | 527 | 0.0 | 265.0 | 6.5e-22 | 4.8e-18 | 65.2 |
Transcript
| Transcript ID | pfu_aug2.0_756.1_21118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_756.1_21118.t1 atggataagtttggctgcagacacttcgcacggagtatttgggtgttgagaaagctctggttagttatccttgcctttct ggttccacttcctttgctggacgaggaccaatatgttaaggaatttcgttgtgcctatgtgattgtggtgatggctatac tatggctgacagaagctctaccaatctccgcaacagccttagctcctatattcctacttccaatgtttggtgtacaaccc gcaaaaactgtcagcgcaaagtatctctcagacacaaacatgttgtttatgggaggtttgattgttgccgtagctttgga agaagtgaatctacacaaacgcattgctgtaggtgttaccatgctccttgggtccagaatgaatacattaatgcttgggt tgatgcttccgacatggttcctatcgatgtggataagtaatacagcggcgacagccatgattgtgtccattaaagtagct gtaacagaacaacttgtagaagtggagaaggcgcacgatcatgtagatcaggaagaggttgaaatgaaggacgtcaaaaa tggaatgcctccgcccgtgattatttcggaaaaagaccaaacaaaaggtggcgggaaagaatataaaatgtacggcaaag cgttttccttgtgtgtggcatatgcagcaaactgtgggggcgtggcaactctaacaggaacgccccctaacttagttctt caaggacaagctgacaatcagtttttgaagttcagtaacaatacagttgatgctggcttgacgtacgcaaaatggatggc ttttggtgtgcctgtgtccttcttactgcttgttctatgttggatctggctgcaaatattcttcctgagaacagaaatct gcaaaagaacagaggaaaccaagaagcaagccgtacaagcagcaatacgaaaagaatgggataaactaggaaaagtcaca tttgccgaggtggcagtgttggtctcgttttctacactggctttattgtggatatttagagacttacccaatgtcggtgg atgggggatggtttttacagatgctgaaactggaaaaaagacagcgtctgattctaccgcagccatgttgatcagcgtcc tcctgtttatcataccacgagaaatccctaatgtcctctgctgtggaacagtagatgacaatggcgagcctatcaaaccc acgtacaaaccaatattaacatggcatgctgtagagaagaaggtggcttggggtgttatcttccttcttgggggagcaac ggctacacttttgatgcccatcatgtttgaactggcattaacagtcggtcagaaccccctttaccttatgatgtcagcgg cagttgcctgctcgttcgcctttatgcttcctgtagccacgccccctaatgctattgtattttctactggctacataaaa atacccgacatggcgcttgctggacttgccatgaatattatagccatacttgttttgaccctagcaatcaacacgtgggg aaatgcattatttgaccttgacactgtaccaagtattttccaaggacaattatcgcaatctaaatgcgatcctcctatct caacgattgcaacgacaaatgtaacaaattttacaacatccaccattagtttaacgagtccatga |
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| Transcript ID | pfu_aug2.0_756.1_21118.t2 |
| Definition | - |
>pfu_aug2.0_756.1_21118.t2 atggataagtttggctgcagacacttcgcacggagtatttgggtgttgagaaagctctggttagttatccttgcctttct ggttccacttcctttgctggacgaggaccaatatgttaaggaatttcgttgtgcctatgtgattgtggtgatggctatac tatggctgacagaagctctaccaatctccgcaacagccttagctcctatattcctacttccaatgtttggtgtacaaccc gcaaaaactgtcagcgcaaagtatctctcagacacaaacatgttgtttatgggaggtttgattgttgccgtagctttgga agaagtgaatctacacaaacgcattgctgtaggtgttaccatgctccttgggtccagaatgaatacattaatgcttgggt tgatgcttccgacatggttcctatcgatgtggataagtaatacagcggcgacagccatgattgtgtccattaaagtagct gtaacagaacaacttgtagaagtggagaaggcgcacgatcatgtagatcaggaagatgaacatgtatttttaaaggagga tagaggatgtcatgaaaactttgaggttgaaatgaaggacgtcaaaaatggaatgcctccgcccgtgattatttcggaaa aagaccaaacaaaaggtggcgggaaagaatataaaatgtacggcaaagcgttttccttgtgtgtggcatatgcagcaaac tgtgggggcgtggcaactctaacaggaacgccccctaacttagttcttcaaggacaagctgacaatcagtttttgaagtt cagtaacaatacagttgatgctggcttgacgtacgcaaaatggatggcttttggtgtgcctgtgtccttcttactgcttg ttctatgttggatctggctgcaaatattcttcctgagaacagaaatctgcaaaagaacagaggaaaccaagaagcaagcc gtacaagcagcaatacgaaaagaatgggataaactaggaaaagtcacatttgccgaggtggcagtgttggtctcgttttc tacactggctttattgtggatatttagagacttacccaatgtcggtggatgggggatggtttttacagatgctgaaactg gaaaaaagacagcgtctgattctaccgcagccatgttgatcagcgtcctcctgtttatcataccacgagaaatccctaat gtcctctgctgtggaacagtagatgacaatggcgagcctatcaaacccacgtacaaaccaatattaacatggcatgctgt agagaagaaggtggcttggggtgttatcttccttcttgggggagcaacggctacacttttgatgcccatcatgtttgaac tggcattaacagtcggtcagaaccccctttaccttatgatgtcagcggcagttgcctgctcgttcgcctttatgcttcct gtagccacgccccctaatgctattgtattttctactggctacataaaaatacccgacatggcgcttgctggacttgccat gaatattatagccatacttgttttgaccctagcaatcaacacgtggggaaatgcattatttgaccttgacactgtaccaa gtattttccaaggacaattatcgcaatctaaatgcgatcctcctatctcaacgattgcaacgacaaatgtaacaaatttt acaacatccaccattagtttaacgagtccatga |
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Protein
| Protein ID | pfu_aug2.0_756.1_21118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_756.1_21118.t1 MDKFGCRHFARSIWVLRKLWLVILAFLVPLPLLDEDQYVKEFRCAYVIVVMAILWLTEALPISATALAPIFLLPMFGVQP AKTVSAKYLSDTNMLFMGGLIVAVALEEVNLHKRIAVGVTMLLGSRMNTLMLGLMLPTWFLSMWISNTAATAMIVSIKVA VTEQLVEVEKAHDHVDQEEVEMKDVKNGMPPPVIISEKDQTKGGGKEYKMYGKAFSLCVAYAANCGGVATLTGTPPNLVL QGQADNQFLKFSNNTVDAGLTYAKWMAFGVPVSFLLLVLCWIWLQIFFLRTEICKRTEETKKQAVQAAIRKEWDKLGKVT FAEVAVLVSFSTLALLWIFRDLPNVGGWGMVFTDAETGKKTASDSTAAMLISVLLFIIPREIPNVLCCGTVDDNGEPIKP TYKPILTWHAVEKKVAWGVIFLLGGATATLLMPIMFELALTVGQNPLYLMMSAAVACSFAFMLPVATPPNAIVFSTGYIK IPDMALAGLAMNIIAILVLTLAINTWGNALFDLDTVPSIFQGQLSQSKCDPPISTIATTNVTNFTTSTISLTSP |
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| Protein ID | pfu_aug2.0_756.1_21118.t2 |
| Definition | - |
>pfu_aug2.0_756.1_21118.t2 MDKFGCRHFARSIWVLRKLWLVILAFLVPLPLLDEDQYVKEFRCAYVIVVMAILWLTEALPISATALAPIFLLPMFGVQP AKTVSAKYLSDTNMLFMGGLIVAVALEEVNLHKRIAVGVTMLLGSRMNTLMLGLMLPTWFLSMWISNTAATAMIVSIKVA VTEQLVEVEKAHDHVDQEDEHVFLKEDRGCHENFEVEMKDVKNGMPPPVIISEKDQTKGGGKEYKMYGKAFSLCVAYAAN CGGVATLTGTPPNLVLQGQADNQFLKFSNNTVDAGLTYAKWMAFGVPVSFLLLVLCWIWLQIFFLRTEICKRTEETKKQA VQAAIRKEWDKLGKVTFAEVAVLVSFSTLALLWIFRDLPNVGGWGMVFTDAETGKKTASDSTAAMLISVLLFIIPREIPN VLCCGTVDDNGEPIKPTYKPILTWHAVEKKVAWGVIFLLGGATATLLMPIMFELALTVGQNPLYLMMSAAVACSFAFMLP VATPPNAIVFSTGYIKIPDMALAGLAMNIIAILVLTLAINTWGNALFDLDTVPSIFQGQLSQSKCDPPISTIATTNVTNF TTSTISLTSP |
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