Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_756.1_21122
Locus scaffold756.1 : 89176 ... 92323 : +
To GenomeBrowser scaffold756.1:89176..92323
Genes list of scaffold scaffold756.1
Synonym pfu_aug1.0_771.1_51069

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_756.1_21122.t1 gi|676448841|ref|XP_009051860.1| hypothetical protein LOTGIDRAFT_159275 [Lottia gigantea] 0.0
pfu_aug2.0_756.1_21122.t1 gi|524917428|ref|XP_005113471.1| PREDICTED: uncharacterized protein LOC101851102, partial [Aplysia californica] 8.0e-25
pfu_aug2.0_756.1_21122.t1 gi|241569713|ref|XP_002402603.1| conserved hypothetical protein [Ixodes scapularis] 2.0e-18
pfu_aug2.0_756.1_21122.t1 gi|675885504|ref|XP_009028254.1| hypothetical protein HELRODRAFT_121515, partial [Helobdella robusta] 9.0e-18

Transcript
Transcript IDpfu_aug2.0_756.1_21122.t1
Definition-
>pfu_aug2.0_756.1_21122.t1
atggaaagttcagatgatgcattgcagtcggagaaagtatcaaaggataccaaatccgcacagaaacgacggaagaaaaa
gcacaagaaaagagcaaagcatggatcaaaggaaaaaatcacatcacctaaggatgacgaaaacgtcgctgttaaaaata
cggatgcagaaaatgataagcaaaactcagaccagaaacgtaagcagcgatctagaagtaattcaacaaaacgtatcaaa
gatttctttcgcaaatctacagatgcaagtgaaacgaaaacttttgaagcattagaccaaaagaggcggtccactttgga
gacttctttcattcaatatacaccatcacataaggacaatggtgacatcgaagcaaaatcgaaaatgaacaaatcagata
gcatttcaaactggttgaaggcttcaaaacaatttgtacacaaacccaaagaagaacagaacaattattcaaaaccttta
aatccagactttgcagataccaataaagaaacatatatgagaaacaacaaagacgaaaaggacgagaaagtgaatagtaa
ggagaaaaatacaaacattagaagcagggtgctaagtcgaagtgagtacagatcaccgagacgctttcagggtaggagca
catccggtgaccggaagtcaaggcatcgtcgtaggagcgaacaattcagaagtcttgaaacaaaagaaatgataaaacct
ctcacaccaacatgggatatcaaagacttgccgttataccttgtgaataaggacagacgtgatagcaaaaatgaaacaga
agacgaaatgaaaacactggactctaaaaaattccctgattcacttacgacaagaagtgtgcaaacttcggttcagaatc
ttacggaactaatgggtccgtctactgaaaaacccattccgccgttacatcctcacattgaaatcagtgaaattgatcca
aaaatgacatttactctcgaaactgacgacattgatcctaaaacttctttattaccaagacaacgctcaaacaaaacaga
ggagaacagtgagagatcagcttctgatattgaagaagttatttcatatctaacacccgaatcgtcaccaaaaccaccga
aaaaattcaaaggtggaatgcaacccttgaaagataaggttaaagttgaacaagagcgaaagcaaaaatctgccactcca
gtttgttctgtttctagcgacagttctaaagacaatagtaagaaatcgtcaacagttgatgacaatatagaggaattcta
cgatgcgcaagatgacatggcaattcaaccgaaaccaaaaggaaaactttctatcatggctatagtagctctaaagcgca
aattggcccgacaaagaaaaaagaagcttcaagcaaaggaagagcaagaggcgcagtcaaaaccgaaagaaaagagtgaa
agcaaaacaaaagagaaagtaaaaggaccgaaagaagagaaagataacaaaaataaggaaaaatcgattagcaaaccaaa
aattgacaatgaaactgatattttcatagaaaacgaaaccaataaaagtttatcaaaattgcatcagttaaaagaatctg
atatactcgaaaaactgataggggcagacgacgaaattattccattagagaaaaagaaaatttcctttgacccagacgat
gagcctattgcttctgatgagcctcttgatgacgccattttgcaacaacgacagaagtcaacaaggcatgtacgcagacg
agaaagtaaaattcgcgaacgacagaagaaagctcttaactgctgcaagaaattcatagcttttcttttctctcatatag
gattaagctctttagttgttgcatactccattctaggaggaattatattccaagctcttgaaggacaaaacgaaattaca
gtacgaaatgacgtcattgagaaacgacagaagtgtattgatcagattgaaaagttagcagttgaaatgcaattaaataa
acgtggtaaggagaaatttcaagaagaagtgaaacaatcattgatgaattttcaaaaggagatatatgaagcgactgcag
cgaaaggatggaaaaatcaagaaaccaaagatgcaaacaatctacagattgaggaacaatggtcgtttgccagttcctta
ttgttcgccattaccattatgactacaatagatctctcttactcctgtatccgtgcctgttcaaagacttcttag

Protein
Protein IDpfu_aug2.0_756.1_21122.t1
Definition-
>pfu_aug2.0_756.1_21122.t1
MESSDDALQSEKVSKDTKSAQKRRKKKHKKRAKHGSKEKITSPKDDENVAVKNTDAENDKQNSDQKRKQRSRSNSTKRIK
DFFRKSTDASETKTFEALDQKRRSTLETSFIQYTPSHKDNGDIEAKSKMNKSDSISNWLKASKQFVHKPKEEQNNYSKPL
NPDFADTNKETYMRNNKDEKDEKVNSKEKNTNIRSRVLSRSEYRSPRRFQGRSTSGDRKSRHRRRSEQFRSLETKEMIKP
LTPTWDIKDLPLYLVNKDRRDSKNETEDEMKTLDSKKFPDSLTTRSVQTSVQNLTELMGPSTEKPIPPLHPHIEISEIDP
KMTFTLETDDIDPKTSLLPRQRSNKTEENSERSASDIEEVISYLTPESSPKPPKKFKGGMQPLKDKVKVEQERKQKSATP
VCSVSSDSSKDNSKKSSTVDDNIEEFYDAQDDMAIQPKPKGKLSIMAIVALKRKLARQRKKKLQAKEEQEAQSKPKEKSE
SKTKEKVKGPKEEKDNKNKEKSISKPKIDNETDIFIENETNKSLSKLHQLKESDILEKLIGADDEIIPLEKKKISFDPDD
EPIASDEPLDDAILQQRQKSTRHVRRRESKIRERQKKALNCCKKFIAFLFSHIGLSSLVVAYSILGGIIFQALEGQNEIT
VRNDVIEKRQKCIDQIEKLAVEMQLNKRGKEKFQEEVKQSLMNFQKEIYEATAAKGWKNQETKDANNLQIEEQWSFASSL
LFAITIMTTIDLSYSCIRACSKTS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495