Gene
| Gene Model ID | pfu_aug2.0_756.1_21125 |
|---|---|
| Locus | scaffold756.1 : 155667 ... 163945 : - |
| To GenomeBrowser | scaffold756.1:155667..163945 |
| Genes list of scaffold | scaffold756.1 |
| Synonym | pfu_aug1.0_4693.1_45009 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_756.1_21125.t1 | 2 | 1 | SRR1 | 90 | 143 | 1.0e-14 | 54.1 | 3.7e-18 | 5.6e-14 | 51.8 |
| pfu_aug2.0_756.1_21125.t1 | 2 | 2 | SRR1 | 185 | 201 | 1.0e-14 | 54.1 | 0.11 | 1600.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_756.1_21125.t1 | gi|512924819|ref|XP_004930686.1| | PREDICTED: SRR1-like protein isoform X1 [Bombyx mori] | 0.0 |
| pfu_aug2.0_756.1_21125.t1 | gi|156394083|ref|XP_001636656.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_756.1_21125.t1 | gi|585724161|ref|XP_006813773.1| | PREDICTED: SRR1-like protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_756.1_21125.t1 | gi|505844354|ref|XP_004615668.1| | PREDICTED: SRR1-like protein [Sorex araneus] | 0.0 |
| pfu_aug2.0_756.1_21125.t1 | gi|390345817|ref|XP_003726417.1| | PREDICTED: SRR1-like protein [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_756.1_21125.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_756.1_21125.t1 atgtcaggttttcaacttgtcaccagaaaaaaaggaaaaaagagcagacagactcatgttttaggcgctaagtcattatc aaacaatgatgacccgccagaggttaatctgacagatctgtataagaagataaatctgtcatgtgaggcagtgagaggtt cccagttttattctgacttcaaaagtatactatttaagcagtcaaggaatgttgaggcagatgttaagtcaagtgaagga gctggggttcagcagtcttttaaggaggtggtatgttatggtctcggtaacttcgcagaatgtgtcatagctcgacacca gctcggccttctactagctctcagagaggaaactcggatgaatgacacaaagattcatatgtttgatccaaaattctggg aagcagaaaaagaaatgttgaggagactgaattgtaatgtattaaccatcaatgaggaagggaaaaggagagtgacagag cccaccctgttctttatgcctcactgcagtaaaagtctgtgtaataatctactgtgggcaaattggtcaccatggcaact gtcaaacctggttatcgtcggtaacagctttaacaacatctgtagcaactcaccagacagaatgttacagcaatctagcg gctatatcaaaaagatttcaccttacgtcaatgagcatcaattgcctgagaatttccagtacagtgatatatttaacgat acgtcagtacactttttcccgtctgatagaatccattctgtttgtgatgagttttggacagactgtactgagcctaccta tgacaaagaagatatagagtatataccatgccaccaggctcattaa |
|
Protein
| Protein ID | pfu_aug2.0_756.1_21125.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_756.1_21125.t1 MSGFQLVTRKKGKKSRQTHVLGAKSLSNNDDPPEVNLTDLYKKINLSCEAVRGSQFYSDFKSILFKQSRNVEADVKSSEG AGVQQSFKEVVCYGLGNFAECVIARHQLGLLLALREETRMNDTKIHMFDPKFWEAEKEMLRRLNCNVLTINEEGKRRVTE PTLFFMPHCSKSLCNNLLWANWSPWQLSNLVIVGNSFNNICSNSPDRMLQQSSGYIKKISPYVNEHQLPENFQYSDIFND TSVHFFPSDRIHSVCDEFWTDCTEPTYDKEDIEYIPCHQAH |
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