Gene
| Gene Model ID | pfu_aug2.0_756.1_21129 |
|---|---|
| Locus | scaffold756.1 : 229111 ... 242709 : - |
| To GenomeBrowser | scaffold756.1:229111..242709 |
| Genes list of scaffold | scaffold756.1 |
| Synonym | pfu_aug1.0_6286.1_31155 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_756.1_21129.t1 | 3 | 1 | TMC | 119 | 157 | 2.0e-38 | 131.2 | 0.23 | 3400.0 | -1.6 |
| pfu_aug2.0_756.1_21129.t1 | 3 | 2 | TMC | 233 | 345 | 2.0e-38 | 131.2 | 1.3999e-42 | 2.0e-38 | 131.2 |
| pfu_aug2.0_756.1_21129.t1 | 3 | 3 | TMC | 410 | 448 | 2.0e-38 | 131.2 | 0.034 | 510.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_756.1_21129.t1 | gi|699672140|ref|XP_009884906.1| | PREDICTED: transmembrane channel-like protein 7 [Charadrius vociferus] | 0.0 |
| pfu_aug2.0_756.1_21129.t1 | gi|551491527|ref|XP_005797334.1| | PREDICTED: transmembrane channel-like protein 7-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_756.1_21129.t1 | gi|573899279|ref|XP_006637371.1| | PREDICTED: nodal modulator 1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_756.1_21129.t1 | gi|723150168|ref|XP_010292496.1| | PREDICTED: transmembrane channel-like protein 7, partial [Phaethon lepturus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_756.1_21129.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_756.1_21129.t1 ctctggcaaaggcttaaagcaggaagtattagatgaaggaggaaaaatgagtcagttttgtaacaaaatattctcaggtt gggatttctgcatctgcaatgaagaaccgtccaaagaaaaacatcgaaaccttttccaggaatttcatagtgatcttgaa aatcaacgactgttgtggaagaaaagtagtagaacatcgaaagacaaagccaagttgtatacaaagagagccgtgatcaa tttactagtggtgtgtttgctaggtgctagcttggctgccattggcttcagcttctttggtgctttagacctacagaaga agtgtgcagactgtcatcctatagtacagtttcttattcaatttatgccgtccctcgttataaccatactaaatgtgatc atgccattgttactaaagaaactggtcatcttggaagactacatgccagcatttgaaattaaaattacgttactcagaac agtaatgctgcggttgtcatctctcctaactatgatgtttgcgttgtacattatcgtgaataaccgatgtgagaaccttg gaaaagatatctcctgtaacgacacacgaacatcctgggcacttaatcctgacgacaaatatccgtacacttgtggaaat cgtaagtggtttggtgaagtagtgaacagtacagtgcaagaatcaactcaaatcaagtgttgggagacctatgtaggaca gcagatttacaagcttgtcatcatggacttcttagtggttgtcttagtaacatttattgttgaatatccaagagggttga tatacaagaaattcaatggtagagtgaagattgttgatttgataggtcaacaagagtttgatttaccgaaagctgttcta gacctggtgtacctacagactctatgttggatgggagtgtttttcagtccattaattccagccatttgtttcttcaaaac tttcatcttattctatgttaaaaagggatccctcatgcataattgtacacagccgactcgagccgtaagaacatccagat ctaactccatgtttgtgggcatgctgcttatgtcattctgtatggtctgcatttctctagcatttatcattggaaatttc agcccttcccagagttgtggaccattcagagtgtatagcaccagtaattttgtttattacgactcagtaagagatctgat tgtaacctttccaagttcagctcaggaagggctatatgtgtttgggactcttaagttcttcattccagctttactagtac tttgtttcataatgtattattactgtgctctgtcaactggttatacaaaaaaagccaacctcctcagagaagagctcata ttggaagggaaggataaacagtacctgcttgcacgtgtaaatgatgcatggcaacatatagaatctactcatggataa |
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Protein
| Protein ID | pfu_aug2.0_756.1_21129.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_756.1_21129.t1 SGKGLKQEVLDEGGKMSQFCNKIFSGWDFCICNEEPSKEKHRNLFQEFHSDLENQRLLWKKSSRTSKDKAKLYTKRAVIN LLVVCLLGASLAAIGFSFFGALDLQKKCADCHPIVQFLIQFMPSLVITILNVIMPLLLKKLVILEDYMPAFEIKITLLRT VMLRLSSLLTMMFALYIIVNNRCENLGKDISCNDTRTSWALNPDDKYPYTCGNRKWFGEVVNSTVQESTQIKCWETYVGQ QIYKLVIMDFLVVVLVTFIVEYPRGLIYKKFNGRVKIVDLIGQQEFDLPKAVLDLVYLQTLCWMGVFFSPLIPAICFFKT FILFYVKKGSLMHNCTQPTRAVRTSRSNSMFVGMLLMSFCMVCISLAFIIGNFSPSQSCGPFRVYSTSNFVYYDSVRDLI VTFPSSAQEGLYVFGTLKFFIPALLVLCFIMYYYCALSTGYTKKANLLREELILEGKDKQYLLARVNDAWQHIESTHG |
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