Gene
| Gene Model ID | pfu_aug2.0_757.1_24371 |
|---|---|
| Locus | scaffold757.1 : 9116 ... 26147 : + |
| To GenomeBrowser | scaffold757.1:9116..26147 |
| Genes list of scaffold | scaffold757.1 |
| Synonym | pfu_aug1.0_2598.1_01165 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_757.1_24371.t3 | 2 | 1 | Membralin | 22 | 180 | 0.0 | 578.5 | 1.54143e-44 | 2.29999e-40 | 138.8 |
| pfu_aug2.0_757.1_24371.t3 | 2 | 2 | Membralin | 204 | 459 | 0.0 | 578.5 | 0.0 | 0.0 | 436.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_757.1_24371.t3 | gi|658844657|ref|XP_008404751.1| | PREDICTED: membralin [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_757.1_24371.t3 | gi|528493912|ref|XP_005156017.1| | PREDICTED: membralin isoform X1 [Danio rerio] | 0.0 |
| pfu_aug2.0_757.1_24371.t3 | gi|348527732|ref|XP_003451373.1| | PREDICTED: membralin-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_757.1_24371.t3 | gi|657739737|ref|XP_008335604.1| | PREDICTED: membralin isoform X1 [Cynoglossus semilaevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_757.1_24371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_757.1_24371.t1 atgtggatggccagaagttcctatctagccgcagcattcatcatgctggtctttactgtgtcagtatccacattgttgag atattcacaccaccagatatttatcttcatagtggacctgttacagatgttagagatgaatgtgactatagcctttcctg cagctcccctactcactgttattcttgcacttgttggcatggaagccataatgtccgaatttttcaacgataccaccaca gcgttttacatcatcctcattgtatggatagccgaccagtatgacgctatatgttgccatacacacatcagtaaaagaca ttggcttaggttcttttacttgtaccacctagccttttacgcatatcattatcgttttaatggacagtatagcggtctcg ctttgctcacttcctggttatttattcagatagattcactattcagtagagaacatttcaaaatgtcaaataacagtaaa aaattctatgaagtacaatgttaa |
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| Transcript ID | pfu_aug2.0_757.1_24371.t2 |
| Definition | - |
>pfu_aug2.0_757.1_24371.t2 atgaatgctgaacaagaaaacaacaacaatgatgtcagaggtcgtaacaatggagggggcagagcacagaatccattact gaatgtgcgagatcgacttttccacgcattgttttaccgtgtagctttaacctatgccagagctgttccaaagcctgtca ggagactcctggaatttgcaattcttttgaaggcattggttgtattaggtatcttggcatatatccacattgtatttgca aggacaccaattaactgcctcggccatatacaagactcatggcctcgacacggcatactgagggtggaaatagtacataa tgcatcagaaaactacagcatcattaactcatatgagaaggaatactcagattttacgaggcacttcttccacaacgacg gcactggagaggacagcaaggaggagggagaggaaggtggaggcagtgaggaagaggaggcagaggacaacttgtcctca gataatgtcaattcaaccatgtcctctaatgaggactcctcaaaagacaccactcatgtgaataggacactgcctcatca ggaggaaactgagcatgtgaacttgtctgtgaccttggacaagggaagttttaaagaagaaagtagcagtgaagaggatt ctcccatagagaatttggaaacggatgctaccaatgattcccaagtttcctcgtccacccctactattaaggaagatact cagtcacatttgattgaatcatacaccttgtctgagattgaaatgctggcaaaagtagtatggccagaggaaaaatatat agtagagtatgccctagagtatggattcttaagactgtcccctaaaaccagggaaagactcaacattactgtaatgttag tcacattagtaaatagaataatattacttagggtattaattagcaaagttaacggacggatggacgatggacaaaccagt atgacaatagctcactttgagccttcggctcagacccagaaaaagatgaatgttttggtgacagtatcagtcgttttctc ctggaggagtttttgggatatgatgacatactga |
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| Transcript ID | pfu_aug2.0_757.1_24371.t3 |
| Definition | - |
>pfu_aug2.0_757.1_24371.t3 atgaatgctgaacaagaaaacaacaacaatgatgtcagaggtcgtaacaatggagggggcagagcacagaatccattact gaatgtgcgagatcgacttttccacgcattgttttaccgtgtagctttaacctatgccagagctgttccaaagcctgtca ggagactcctggaatttgcaattcttttgaaggcattggttgtattaggtatcttggcatatatccacattgtatttgca aggacaccaattaactgcctcggccatatacaagactcatggcctcgacacggcatactgagggtggaaatagtacataa tgcatcagaaaactacagcatcattaactcatatgagaaggaatactcagattttacgaggcacttcttccacaacgacg gcactggagaggacagcaaggaggagggagaggaaggtggaggcagtgaggaagaggaggcagaggacaacttgtcctca gataatgtcaattcaaccatgtcctctaatgaggactcctcaaaagacaccactcatgtgaataggacactgcctcatca ggaggaaactgagcatgtgaacttgtctgtgaccttggacaagggaagttttaaagaagaaagtagcagtgaagaggatt ctcccatagagaatttggaaacggatgctaccaatgattcccaagtttcctcgtccacccctactattaaggaagatact cagtcacatttgattgaatcatacaccttgtctgagattgaaatgctggcaaaagtagtatggccagaggaaaaatatat agtagagtatgccctagagtatggattcttaagactgtcccctaaaaccagggaaagactcaacattactgtaatgttag tcacattagacccagaaaaagatgaatgttttggtgacagtatcagtcgttttctcctggaggagtttttgggatatgat gacatactgatgtccagtatcaaacaactagcggaaaaagaagataataaaggatatttacggaatgtagtgacaggaga acactacaggtttgtcagtatgtggatggccagaagttcctatctagccgcagcattcatcatgctggtctttactgtgt cagtatccacattgttgagatattcacaccaccagatatttatcttcatagtggacctgttacagatgttagagatgaat gtgactatagcctttcctgcagctcccctactcactgttattcttgcacttgttggcatggaagccataatgtccgaatt tttcaacgataccaccacagcgttttacatcatcctcattgtatggatagccgaccagtatgacgctatatgttgccata cacacatcagtaaaagacattggcttaggttcttttacttgtaccacctagccttttacgcatatcattatcgttttaat ggacagtatagcggtctcgctttgctcacttcctggttatttattcagctagaaaacaaaaagggcagggcgtcagagat tccacatcagcatacaaactcattatcagagagagattcgccaaatattccaagcacttcatcagaagtgactagtaacc agtcctatgcaagacatagaagtgttgatagtgaaatgcaaagtactctacaaaatagccatataattagagacagaagt tctatagattctgatccatccaaaagtgcaatgcctagtgataatgatgtacgtctttcaagtaatagtgataattcaaa ttttaatgatgcatcagtgacaaaagtaacgaaaaataccaattctgatagaacggatgatagtgcaaatgggacatctg tttga |
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Protein
| Protein ID | pfu_aug2.0_757.1_24371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_757.1_24371.t1 MWMARSSYLAAAFIMLVFTVSVSTLLRYSHHQIFIFIVDLLQMLEMNVTIAFPAAPLLTVILALVGMEAIMSEFFNDTTT AFYIILIVWIADQYDAICCHTHISKRHWLRFFYLYHLAFYAYHYRFNGQYSGLALLTSWLFIQIDSLFSREHFKMSNNSK KFYEVQC |
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| Protein ID | pfu_aug2.0_757.1_24371.t2 |
| Definition | - |
>pfu_aug2.0_757.1_24371.t2 MNAEQENNNNDVRGRNNGGGRAQNPLLNVRDRLFHALFYRVALTYARAVPKPVRRLLEFAILLKALVVLGILAYIHIVFA RTPINCLGHIQDSWPRHGILRVEIVHNASENYSIINSYEKEYSDFTRHFFHNDGTGEDSKEEGEEGGGSEEEEAEDNLSS DNVNSTMSSNEDSSKDTTHVNRTLPHQEETEHVNLSVTLDKGSFKEESSSEEDSPIENLETDATNDSQVSSSTPTIKEDT QSHLIESYTLSEIEMLAKVVWPEEKYIVEYALEYGFLRLSPKTRERLNITVMLVTLVNRIILLRVLISKVNGRMDDGQTS MTIAHFEPSAQTQKKMNVLVTVSVVFSWRSFWDMMTY |
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| Protein ID | pfu_aug2.0_757.1_24371.t3 |
| Definition | - |
>pfu_aug2.0_757.1_24371.t3 MNAEQENNNNDVRGRNNGGGRAQNPLLNVRDRLFHALFYRVALTYARAVPKPVRRLLEFAILLKALVVLGILAYIHIVFA RTPINCLGHIQDSWPRHGILRVEIVHNASENYSIINSYEKEYSDFTRHFFHNDGTGEDSKEEGEEGGGSEEEEAEDNLSS DNVNSTMSSNEDSSKDTTHVNRTLPHQEETEHVNLSVTLDKGSFKEESSSEEDSPIENLETDATNDSQVSSSTPTIKEDT QSHLIESYTLSEIEMLAKVVWPEEKYIVEYALEYGFLRLSPKTRERLNITVMLVTLDPEKDECFGDSISRFLLEEFLGYD DILMSSIKQLAEKEDNKGYLRNVVTGEHYRFVSMWMARSSYLAAAFIMLVFTVSVSTLLRYSHHQIFIFIVDLLQMLEMN VTIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWIADQYDAICCHTHISKRHWLRFFYLYHLAFYAYHYRFN GQYSGLALLTSWLFIQLENKKGRASEIPHQHTNSLSERDSPNIPSTSSEVTSNQSYARHRSVDSEMQSTLQNSHIIRDRS SIDSDPSKSAMPSDNDVRLSSNSDNSNFNDASVTKVTKNTNSDRTDDSANGTSV |
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