Gene
| Gene Model ID | pfu_aug2.0_757.1_24375 |
|---|---|
| Locus | scaffold757.1 : 67846 ... 80870 : + |
| To GenomeBrowser | scaffold757.1:67846..80870 |
| Genes list of scaffold | scaffold757.1 |
| Synonym | pfu_aug1.0_18810.1_03942 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_757.1_24375.t1 | 2 | 1 | TPR_11 | 61 | 125 | 3.6e-10 | 39.3 | 6.8e-09 | 1.1e-05 | 24.9 |
| pfu_aug2.0_757.1_24375.t1 | 3 | 1 | TPR_2 | 65 | 93 | 2.7e-08 | 33.0 | 0.00011 | 0.18 | 11.7 |
| pfu_aug2.0_757.1_24375.t1 | 2 | 1 | TPR_1 | 67 | 93 | 5.3e-06 | 25.7 | 0.0025 | 4.1 | 7.1 |
| pfu_aug2.0_757.1_24375.t1 | 3 | 2 | TPR_2 | 99 | 126 | 2.7e-08 | 33.0 | 1.9 | 3200.0 | -1.5 |
| pfu_aug2.0_757.1_24375.t1 | 2 | 2 | TPR_11 | 131 | 165 | 3.6e-10 | 39.3 | 8.1e-05 | 0.13 | 11.8 |
| pfu_aug2.0_757.1_24375.t1 | 3 | 3 | TPR_2 | 131 | 161 | 2.7e-08 | 33.0 | 1.1e-06 | 0.0018 | 18.0 |
| pfu_aug2.0_757.1_24375.t1 | 2 | 2 | TPR_1 | 134 | 161 | 5.3e-06 | 25.7 | 3.4e-06 | 0.0056 | 16.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_757.1_24375.t1 | gi|676430598|ref|XP_009045979.1| | hypothetical protein LOTGIDRAFT_56543, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_757.1_24375.t1 | gi|50540514|ref|NP_001002722.1| | tetratricopeptide repeat protein 33 [Danio rerio] | 0.0 |
| pfu_aug2.0_757.1_24375.t1 | gi|390356823|ref|XP_003728867.1| | PREDICTED: tetratricopeptide repeat protein 33 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_757.1_24375.t1 | gi|291225185|ref|XP_002732581.1| | PREDICTED: tetratricopeptide repeat protein 33-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_757.1_24375.t1 | gi|657574491|ref|XP_008290954.1| | PREDICTED: tetratricopeptide repeat protein 33 isoform X2 [Stegastes partitus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_757.1_24375.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_757.1_24375.t1 atgacatcctttggatggaaacgcaaacttggtgaaaatgtgtcccataaaaaatcaacagcatttgaagaggaggcaaa agatgaagataatgatgtcatagaaaggggagatgttgattggctgacactattaccaaatagaaaggtcatacgacttg aagatgcacaagcaaaaagtgcacgactgaaggcagaaggatccctcctagcagaatcggagagatattgggaggccatg aaaaagtgggatgaagcaatacaacttacaccaaatgatgaaactctgtatgaaatgaaagcacaggcactaattatttt gtgtgaggtgttccctgcagtaagtacggccagaaaagtgacggagttgaaaccaacatggtgggtgggacatcaaaccc ttggtagagctctgctaggacttggtgaagttagaatggcagtgaaaagtttttctcgagcagtacatttaaatccaacc gataacgaactgtggggtgaagatttgatgtgggctgtatccctgctgtcgagaagacgtaaattggagggggaaaaaga aacttcaagtgttaaaattactgaattagaagaatcagaaaatgtaaatacttgtactgatttatcatcgcataaaagtg acatgtatagtgatttttcttcagaaagtcaggaagaaaataagacggatataaattatgtacctggaaattatgtgaaa atgaggaattga |
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Protein
| Protein ID | pfu_aug2.0_757.1_24375.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_757.1_24375.t1 MTSFGWKRKLGENVSHKKSTAFEEEAKDEDNDVIERGDVDWLTLLPNRKVIRLEDAQAKSARLKAEGSLLAESERYWEAM KKWDEAIQLTPNDETLYEMKAQALIILCEVFPAVSTARKVTELKPTWWVGHQTLGRALLGLGEVRMAVKSFSRAVHLNPT DNELWGEDLMWAVSLLSRRRKLEGEKETSSVKITELEESENVNTCTDLSSHKSDMYSDFSSESQEENKTDINYVPGNYVK MRN |
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