Gene
| Gene Model ID | pfu_aug2.0_757.1_24379 |
|---|---|
| Locus | scaffold757.1 : 135434 ... 147205 : - |
| To GenomeBrowser | scaffold757.1:135434..147205 |
| Genes list of scaffold | scaffold757.1 |
| Synonym | pfu_aug1.0_2277.1_01031 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| camp and camp-inhibited cgmp -cyclic | GO:0004114 GO:0007165 GO:0008152 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_757.1_24379.t3 | 2 | 1 | GAF | 1 | 86 | 1.2e-17 | 64.4 | 2.6e-20 | 4.3e-17 | 62.6 |
| pfu_aug2.0_757.1_24379.t3 | 1 | 1 | GAF_3 | 5 | 88 | 2.2e-06 | 27.8 | 2.4e-09 | 4.0e-06 | 26.9 |
| pfu_aug2.0_757.1_24379.t3 | 1 | 1 | GAF_2 | 10 | 86 | 1.4e-07 | 32.1 | 1.5e-10 | 2.4e-07 | 31.3 |
| pfu_aug2.0_757.1_24379.t3 | 3 | 1 | PDEase_I | 86 | 124 | 0.0 | 244.5 | 3.3 | 5400.0 | -3.2 |
| pfu_aug2.0_757.1_24379.t3 | 3 | 2 | PDEase_I | 190 | 392 | 0.0 | 244.5 | 0.0 | 0.0 | 210.0 |
| pfu_aug2.0_757.1_24379.t3 | 2 | 2 | GAF | 329 | 353 | 1.2e-17 | 64.4 | 1.8 | 3000.0 | -1.9 |
| pfu_aug2.0_757.1_24379.t3 | 3 | 3 | PDEase_I | 391 | 450 | 0.0 | 244.5 | 4.0e-11 | 6.6e-08 | 32.5 |
Transcript
| Transcript ID | pfu_aug2.0_757.1_24379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_757.1_24379.t1 atggacaaaggagtagctggtcacgtggcatccactggtcagatactgaatattgtagatgcatacacggacatcagatt taacagagatgttgaccttcaaacgggttacagaaccaaaagtattctgtgtatgcctatttacattcgtggaaatataa taggcgtggtccagatggtcaacaaaatagatggcgcatttacaacagctgacgaggaatcgtttgaaacttttgccata tactgtggtcttgccctccatcacgcaaagttatatgacaaaatcagaaggtcagagcagaaatacaaggtggcggtgga ggtcctgtcataccacagtcagtgtacggacgaggagtaccagtccatcaaagagaggcccctccccgaccaagcaccca tggcaatactggactacaggttttcgccatggtctatagagggtgacgataaaccagtatatgttctctacatgatgaga gatatcttccagatgcactcacatagtaaaaaacatgacaagaggtttgaccttgatgacatcacaaggttcacccttac cgtcaggaaaaactaccggaacgtcccataccataactgggcgcatgcgttctctgtcgcgcacgccgtattcacagtca tcaaaacagccaagcaccagtttacgcctgtggagtgtttagcgttgttcgtcgcttgtctatgtcatgacttagaccac agaggaaaaaccaacgcctttatggtcaagagtgcctcaccgctagctgccatatattccacctcaacaatggagcacca ccacttcaaccataccgtcaccattcttcagaatgacggtcacaatattttcaagtacctctcatcagctgaatacaagc agatacttggtgacattcgtcattgtattcttgcaaccgaccttgcactgttcttcggaaacaagtcccgtcttcaggat atttgctcaaagggcgagttttcctgggataaaatggagcacagacgcctagtaatggccaactccatgactgcatgtga tctgtgttctatgtataaaccctgggatattcaactccagcttgtagacgtcattatggaagagttctggcaacagggtg atgaggaaaagaaattggggaaattaccacatccaatgatggatagagaaaatgcccctgagttaccagaaactcaggtt gggttcttggttggtatatgcttaccatgttacgagctgatggcgatggtacttcccgagacgcagccaatggtagatgg cgctgtcgataatctgaagaggtggcgagaattggccgatcagcagaacgaaaaggaagaaaacgacgaagaaagtgaat cgaaagacaaaagtaaaaactcgaaagaagacgaagatcaaacggtctcaaaaaatgattctgaacattccagtgaacaa aaggacgaggacagctcaaataccaaagatacagacgatgttcaaacttctgaacaagtgacacaaagagaaagtgacct cgattcagcaagggtgcaagcagacgatgagataactcagtga |
|
| Transcript ID | pfu_aug2.0_757.1_24379.t2 |
| Definition | - |
>pfu_aug2.0_757.1_24379.t2 atggacaaaggagtagctggtcacgtggcatccactggtcagatactgaatattgtagatgcatacacggacatcagatt taacagagatgttgaccttcaaacgggttacagaaccaaaagtattctgtgtatgcctatttacattcgtggaaatataa taggcgtggtccagatggtcaacaaaatagatggcgcatttacaacagctgacgaggaatcgtttgaaacttttgccata tactgtggtcttgccctccatcacgcaaagttatatgacaaaatcagaaggtcagagcagaaatacaaggtggcggtgga ggtcctgtcataccacagtcagtgtacggacgaggagtaccagtccatcaaagagaggcccctccccgaccaagcaccca tggcaatactggactacaggttttcgccatggtctatagagggtgacgataaaccagtatatgttctctacatgatgaga gatatcttccagatgcactcacatagtaaaaaacatgacaagaggtttgaccttgatgacatcacaaggttcacccttac cgtcaggaaaaactaccggaacgtcccataccataactgggcgcatgcgttctctgtcgcgcacgccgtattcacagtca tcaaaacagccaagcaccagtttacgcctgtggagtgtttagcgttgttcgtcgcttgtctatgtcatgacttagaccac agaggaaaaaccaacgcctttatggtcaagagtgcctcaccgctagctgccatatattccacctcaacaatggagcacca ccacttcaaccataccgtcaccattcttcagaatgacggtcacaatattttcaagtacctctcatcagctgaatacaagc agatacttggtgacattcgtcattgtattcttgcaaccgaccttgcactgttcttcggaaacaagtcccgtcttcaggat atttgctcaaagggcgagttttcctgggataaaatggagcacagacgcctagtaatggccaactccatgactgcatgtga tctgtgttctatgtataaaccctgggatattcaactccagcttgtagacgtcattatggaagagttctggcaacagggtg atgaggaaaagaaattggggaaattaccacatccaatgatggatagagaaaatgcccctgagttaccagaaactcagggt gatgaggagagatcacagggactaacacccatgccaatgatggatagaagaaagaaaaatgaactccctcagttagaggt tgggttcttggttggtatatgcttaccatgttacgagctgatggcgatggtacttcccgagacgcagccaatggtagatg gcgctgtcgataatctgaagaggtggcgagaattggccgatcagcagaacgaaaaggaagaaaacgacgaagaaagtgaa tcgaaagacaaaagtaaaaactcgaaagaagacgaagatcaaacggtctcaaaaaatgattctgaacattccagtgaaca aaaggacgaggacagctcaaataccaaagatacagacgatgttcaaacttctgaacaagtgacacaaagagaaagtgacc tcgattcagcaagggtgcaagcagacgatgagataactcagtga |
|
| Transcript ID | pfu_aug2.0_757.1_24379.t3 |
| Definition | - |
>pfu_aug2.0_757.1_24379.t3 atggacaaaggagtagctggtcacgtggcatccactggtcagatactgaatattgtagatgcatacacggacatcagatt taacagagatgttgaccttcaaacgggttacagaaccaaaagtattctgtgtatgcctatttacattcgtggaaatataa taggcgtggtccagatggtcaacaaaatagatggcgcatttacaacagctgacgaggaatcgtttgaaacttttgccata tactgtggtcttgccctccatcacgcaaagttatatgacaaaatcagaaggtcagagcagaaatacaaggtggcggtgga ggtcctgtcataccacagtcagtgtacggacgaggagtaccagtccatcaaagagaggcccctccccgaccaagcaccca tggcaatactggactacaggttttcgccatggtctatagagggtgacgataaaccagtatatgttctctacatgatgaga gatatcttccagatgcactcacagtttgaccttgatgacatcacaaggttcacccttaccgtcaggaaaaactaccggaa cgtcccataccataactgggcgcatgcgttctctgtcgcgcacgccgtattcacagtcatcaaaacagccaagcaccagt ttacgcctgtggagtgtttagcgttgttcgtcgcttgtctatgtcatgacttagaccacagaggaaaaaccaacgccttt atggtcaagagtgcctcaccgctagctgccatatattccacctcaacaatggagcaccaccacttcaaccataccgtcac cattcttcagaatgacggtcacaatattttcaagtacctctcatcagctgaatacaagcagatacttggtgacattcgtc attgtattcttgcaaccgaccttgcactgttcttcggaaacaagtcccgtcttcaggatatttgctcaaagggcgagttt tcctgggataaaatggagcacagacgcctagtaatggccaactccatgactgcatgtgatctgtgttctatgtataaacc ctgggatattcaactccagcttgtagacgtcattatggaagagttctggcaacagggtgatgaggaaaagaaattgggga aattaccacatccaatgatggatagagaaaatgcccctgagttaccagaaactcagggtgatgaggagagatcacaggga ctaacacccatgccaatgatggatagaagaaagaaaaatgaactccctcagttagaggttgggttcttggttggtatatg cttaccatgttacgagctgatggcgatggtacttcccgagacgcagccaatggtagatggcgctgtcgataatctgaaga ggtggcgagaattggccgatcagcagaacgaaaaggaagaaaacgacgaagaaagtgaatcgaaagacaaaagtaaaaac tcgaaagaagacgaagatcaaacggtctcaaaaaatgattctgaacattccagtgaacaaaaggacgaggacagctcaaa taccaaagatacagacgatgttcaaacttctgaacaagtgacacaaagagaaagtgacctcgattcagcaagggtgcaag cagacgatgagataactcagtga |
|
Protein
| Protein ID | pfu_aug2.0_757.1_24379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_757.1_24379.t1 MDKGVAGHVASTGQILNIVDAYTDIRFNRDVDLQTGYRTKSILCMPIYIRGNIIGVVQMVNKIDGAFTTADEESFETFAI YCGLALHHAKLYDKIRRSEQKYKVAVEVLSYHSQCTDEEYQSIKERPLPDQAPMAILDYRFSPWSIEGDDKPVYVLYMMR DIFQMHSHSKKHDKRFDLDDITRFTLTVRKNYRNVPYHNWAHAFSVAHAVFTVIKTAKHQFTPVECLALFVACLCHDLDH RGKTNAFMVKSASPLAAIYSTSTMEHHHFNHTVTILQNDGHNIFKYLSSAEYKQILGDIRHCILATDLALFFGNKSRLQD ICSKGEFSWDKMEHRRLVMANSMTACDLCSMYKPWDIQLQLVDVIMEEFWQQGDEEKKLGKLPHPMMDRENAPELPETQV GFLVGICLPCYELMAMVLPETQPMVDGAVDNLKRWRELADQQNEKEENDEESESKDKSKNSKEDEDQTVSKNDSEHSSEQ KDEDSSNTKDTDDVQTSEQVTQRESDLDSARVQADDEITQ |
|
| Protein ID | pfu_aug2.0_757.1_24379.t2 |
| Definition | - |
>pfu_aug2.0_757.1_24379.t2 MDKGVAGHVASTGQILNIVDAYTDIRFNRDVDLQTGYRTKSILCMPIYIRGNIIGVVQMVNKIDGAFTTADEESFETFAI YCGLALHHAKLYDKIRRSEQKYKVAVEVLSYHSQCTDEEYQSIKERPLPDQAPMAILDYRFSPWSIEGDDKPVYVLYMMR DIFQMHSHSKKHDKRFDLDDITRFTLTVRKNYRNVPYHNWAHAFSVAHAVFTVIKTAKHQFTPVECLALFVACLCHDLDH RGKTNAFMVKSASPLAAIYSTSTMEHHHFNHTVTILQNDGHNIFKYLSSAEYKQILGDIRHCILATDLALFFGNKSRLQD ICSKGEFSWDKMEHRRLVMANSMTACDLCSMYKPWDIQLQLVDVIMEEFWQQGDEEKKLGKLPHPMMDRENAPELPETQG DEERSQGLTPMPMMDRRKKNELPQLEVGFLVGICLPCYELMAMVLPETQPMVDGAVDNLKRWRELADQQNEKEENDEESE SKDKSKNSKEDEDQTVSKNDSEHSSEQKDEDSSNTKDTDDVQTSEQVTQRESDLDSARVQADDEITQ |
|
| Protein ID | pfu_aug2.0_757.1_24379.t3 |
| Definition | - |
>pfu_aug2.0_757.1_24379.t3 MDKGVAGHVASTGQILNIVDAYTDIRFNRDVDLQTGYRTKSILCMPIYIRGNIIGVVQMVNKIDGAFTTADEESFETFAI YCGLALHHAKLYDKIRRSEQKYKVAVEVLSYHSQCTDEEYQSIKERPLPDQAPMAILDYRFSPWSIEGDDKPVYVLYMMR DIFQMHSQFDLDDITRFTLTVRKNYRNVPYHNWAHAFSVAHAVFTVIKTAKHQFTPVECLALFVACLCHDLDHRGKTNAF MVKSASPLAAIYSTSTMEHHHFNHTVTILQNDGHNIFKYLSSAEYKQILGDIRHCILATDLALFFGNKSRLQDICSKGEF SWDKMEHRRLVMANSMTACDLCSMYKPWDIQLQLVDVIMEEFWQQGDEEKKLGKLPHPMMDRENAPELPETQGDEERSQG LTPMPMMDRRKKNELPQLEVGFLVGICLPCYELMAMVLPETQPMVDGAVDNLKRWRELADQQNEKEENDEESESKDKSKN SKEDEDQTVSKNDSEHSSEQKDEDSSNTKDTDDVQTSEQVTQRESDLDSARVQADDEITQ |
|