Gene
| Gene Model ID | pfu_aug2.0_759.1_31137 |
|---|---|
| Locus | scaffold759.1 : 1 ... 18628 : + |
| To GenomeBrowser | scaffold759.1:1..18628 |
| Genes list of scaffold | scaffold759.1 |
| Synonym | pfu_aug1.0_1824.1_37130 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_759.1_31137.t1 | 1 | 1 | NDT80_PhoG | 192 | 337 | 8.8e-28 | 97.5 | 3.7e-30 | 1.1e-26 | 93.9 |
| pfu_aug2.0_759.1_31137.t1 | 2 | 1 | Peptidase_S74 | 385 | 446 | 3.5e-13 | 49.4 | 8.7e-16 | 2.6e-12 | 46.6 |
| pfu_aug2.0_759.1_31137.t1 | 1 | 1 | MRF_C1 | 466 | 501 | 6.6e-21 | 73.0 | 4.1e-24 | 1.2e-20 | 72.1 |
| pfu_aug2.0_759.1_31137.t1 | 2 | 2 | Peptidase_S74 | 837 | 849 | 3.5e-13 | 49.4 | 0.19 | 560.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_759.1_31137.t1 | gi|676448200|ref|XP_009051656.1| | hypothetical protein LOTGIDRAFT_103525, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_759.1_31137.t1 | gi|585656988|ref|XP_006815766.1| | PREDICTED: myelin regulatory factor-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_759.1_31137.t1 | gi|657599741|ref|XP_008304696.1| | PREDICTED: myelin regulatory factor-like, partial [Stegastes partitus] | 0.0 |
| pfu_aug2.0_759.1_31137.t1 | gi|658855437|ref|XP_008410357.1| | PREDICTED: myelin regulatory factor isoform X3 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_759.1_31137.t1 | gi|658855439|ref|XP_008410360.1| | PREDICTED: myelin regulatory factor isoform X4 [Poecilia reticulata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_759.1_31137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_759.1_31137.t1 aaagtaaatacggcatcgtaaacccagcaacgacgatgcatcaacacatgtacccgccccatcatcgcccgccgggccta ctgccacatgcccacaagatgccgcctgggtataacgagcccctcaatcacctgctccctacccaccccgctcctcagtc ctccacccctctacctctgccaccgacacaagccaacccatctatacccctgtctccaccccacctcagtccggtgaatg gctgtaacaagaagagaaaattctccgactcgccaaacagcagtctcaccaacgctctactggctggacgaaatggtgta ctcaatataaaacaggagcctaatggatctggcttcatgaacagttatataggagactgtgatgatgattttgggtatga cccagacaacagtagtacaggatatctggacagttcttaccaggtcatcaagtggtcacaatatctacagaaagaatggg cgacactcaaaaatgaacaactaaaagacatacccccgccatcatatagagtggatgcagacaagggattcaacttctcc cagcctgacgactcatttgtctgccagaaaaagaatcacttccaggtcacagttcacacgctggtcaacggcgaccctaa atatgtcacaacgccagacggagtcaaaaagattgacagctttcatctacacttctttggaatcaagatggagtcacaaa ctcagactataaaaatagagcaatcacagtcagaccgcagtaaaaaaccattctacccagtcagagttgacttggtccca gatcagaccaataaaatcacagtcggtaggttacacttcagtgagactactgccaataatatgagaaagaaggggaggcc aaatcctgatcagcgatatttcatgctcgtcgtaggattgtatgcccacagtggcgaaaataaattcttggtggctggca gtgtatctgagaaaatcattgtcagggcatccaatcctggtcagtttgacaatgatgttgatgtaaactggcagaaagga cagacgggggatagtgtgttccatgtgggcagggtgggcattaatactgaccacccggaggaagcactgaccgtccacgg aaacatgagtctgacgggaagaatgtatcaaccgtctgacatcagggcaaaggaaaacctcaaagaggttaattccaaaa agcagttggaaaaccttgccaagctgaaaatctacgagtacaattacagcgaagatttcgcagacactgttggtatcccc gaaaacggaagaaaagatacaggtgtcatagctcaagaggtcaaggacatattacctgatgcagtacgagaaacaggaga tgtaccgttaccaaatggtgacgtcatagaaaatctcctggttgtagataaggaacgtgttttcatggaaaatgtgggag ctgtgaaagaattgtgtaaattaacagacaatttggaagtgagaatagatgaactagaaaaaatgaataaaaaacttgca aagttgaaaagatatgacagtttaaaatctactgtgagctccaagtcttcatgtagtgtcagtactgtcagttcttcacc tccaaagaaatcatcatcttcatcatccccgtcagcagccaaatataatcataatcgtcacaaaccgtcaagtcgtaaac cgtcggacatgaaaccagcggtagataacggctggtgtagtaaccgattcatacaggttaccatcttcacattgatactc atcatggctctgtgccttatagctattacaatactttacatactggagagacaaagggagacaaatcatacaactaccac ctcccacaacttggcagcaattcccacacaggccgggcatcatggcaagtctacgccttcaccacgacctaagagtcgta tgccctcggtaaatatgtcggctactacaatcagtccgcagataggaccttcaactgtaataccaatgtcacagtttccg ccttaccctccatgtgatccccagagacagttatgtgagaggaagtgctgtcccccacccacccaagatgatggggagga gacgcccgctgtaacatatagctactctccgtatagagtctcggatagtcaggttactgtgcctgttttaccgccctacc ctccgtgtaaccccaggagacaactctgccataggatttgctgtcctccaccatttaattcaagtccctctaaatacagt aaccaatatcgtaatgaaagcaataggtttaaataccgtgtttgtaagttatggagcacccctggtttacaggacatttt ttttcatcacggaacatgatcgggaaaagatctgcagccagaccttgcactgactgcagggaaccacatctgtactatta ctcttaatcccaaagataacaacattccacaggtagtcataaacaccattaacgagtctcatcaccatgaccctgaggtc aaatatgacgaccctggtaaccttgacaacaaccagataaaggtcgtctattacagatacagacgaagcgccagtccagt aaatgatggcaaattcttcagcagtcggtttatattcagagtggcacaaaaaacgcttacagatgtttgtagcttagaga aaacgacgtcagacgtgcaatatgcagaatatcgacttgacttccacaggacgtgcgatggcggagaattgtga |
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Protein
| Protein ID | pfu_aug2.0_759.1_31137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_759.1_31137.t1 SKYGIVNPATTMHQHMYPPHHRPPGLLPHAHKMPPGYNEPLNHLLPTHPAPQSSTPLPLPPTQANPSIPLSPPHLSPVNG CNKKRKFSDSPNSSLTNALLAGRNGVLNIKQEPNGSGFMNSYIGDCDDDFGYDPDNSSTGYLDSSYQVIKWSQYLQKEWA TLKNEQLKDIPPPSYRVDADKGFNFSQPDDSFVCQKKNHFQVTVHTLVNGDPKYVTTPDGVKKIDSFHLHFFGIKMESQT QTIKIEQSQSDRSKKPFYPVRVDLVPDQTNKITVGRLHFSETTANNMRKKGRPNPDQRYFMLVVGLYAHSGENKFLVAGS VSEKIIVRASNPGQFDNDVDVNWQKGQTGDSVFHVGRVGINTDHPEEALTVHGNMSLTGRMYQPSDIRAKENLKEVNSKK QLENLAKLKIYEYNYSEDFADTVGIPENGRKDTGVIAQEVKDILPDAVRETGDVPLPNGDVIENLLVVDKERVFMENVGA VKELCKLTDNLEVRIDELEKMNKKLAKLKRYDSLKSTVSSKSSCSVSTVSSSPPKKSSSSSSPSAAKYNHNRHKPSSRKP SDMKPAVDNGWCSNRFIQVTIFTLILIMALCLIAITILYILERQRETNHTTTTSHNLAAIPTQAGHHGKSTPSPRPKSRM PSVNMSATTISPQIGPSTVIPMSQFPPYPPCDPQRQLCERKCCPPPTQDDGEETPAVTYSYSPYRVSDSQVTVPVLPPYP PCNPRRQLCHRICCPPPFNSSPSKYSNQYRNESNRFKYRVCKLWSTPGLQDIFFHHGTXSGKDLQPDLALTAGNHICTIT LNPKDNNIPQVVINTINESHHHDPEVKYDDPGNLDNNQIKVVYYRYRRSASPVNDGKFFSSRFIFRVAQKTLTDVCSLEK TTSDVQYAEYRLDFHRTCDGGEL |
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